6UQE
ClpA/ClpP Disengaged State bound to RepA-GFP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038758 | 3002019 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038757 | 3002019 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038757 | 3002019 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038758 | 3002019 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038757 | 3002019 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038758 | 3002019 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038757 | 3002019 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038758 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038758 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038757 | 3002019 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038758 | 3002019 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038757 | 3002019 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | ClpB_D2-small | e6uqeB4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: ClpB_D2-small | ECOD (1.6) |
B | chaperone_ClpB | e6uqeB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: chaperone_ClpB | ECOD (1.6) |
B | Sigma54_activat | e6uqeB3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
E | ClpB_D2-small | e6uqeE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: ClpB_D2-small | ECOD (1.6) |
E | chaperone_ClpB | e6uqeE4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: chaperone_ClpB | ECOD (1.6) |
E | Sigma54_activat | e6uqeE3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
A | ClpB_D2-small | e6uqeA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: ClpB_D2-small | ECOD (1.6) |
A | chaperone_ClpB | e6uqeA4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: chaperone_ClpB | ECOD (1.6) |
A | Sigma54_activat | e6uqeA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
C | ClpB_D2-small | e6uqeC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: ClpB_D2-small | ECOD (1.6) |
C | chaperone_ClpB | e6uqeC4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: chaperone_ClpB | ECOD (1.6) |
C | Sigma54_activat | e6uqeC2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
D | ClpB_D2-small | e6uqeD4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: ClpB_D2-small | ECOD (1.6) |
D | chaperone_ClpB | e6uqeD3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: chaperone_ClpB | ECOD (1.6) |
D | Sigma54_activat | e6uqeD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
F | ClpB_D2-small | e6uqeF4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: ClpB_D2-small | ECOD (1.6) |
F | chaperone_ClpB | e6uqeF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: chaperone_ClpB | ECOD (1.6) |
F | Sigma54_activat | e6uqeF3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
G | CLP_protease | e6uqeG1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
L | CLP_protease | e6uqeL1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
R | CLP_protease | e6uqeR1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
H | CLP_protease | e6uqeH1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
I | CLP_protease | e6uqeI1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
J | CLP_protease | e6uqeJ1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
K | CLP_protease | e6uqeK1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
M | CLP_protease | e6uqeM1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
N | CLP_protease | e6uqeN1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
O | CLP_protease | e6uqeO1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
P | CLP_protease | e6uqeP1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
Q | CLP_protease | e6uqeQ1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
S | CLP_protease | e6uqeS1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
T | CLP_protease | e6uqeT1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10431 | C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) | C-terminal, D2-small domain, of ClpB protein | This is the C-terminal domain of ClpB protein, referred to as the D2-small domain, and is a mixed alpha-beta structure. Compared with the D1-small domain (included in AAA, Pfam:PF00004) it lacks the long coiled-coil insertion, and instead of helix C4 ... | Domain | |
PF17871 | AAA lid domain (AAA_lid_9) | AAA lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain | |
PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain | |
PF07724 | AAA domain (Cdc48 subfamily) (AAA_2) | AAA domain (Cdc48 subfamily) | This Pfam entry includes some of the AAA proteins not detected by the Pfam:PF00004 model. | Domain | |
PF00574 | Clp protease (CLP_protease) | Clp protease | The Clp protease has an active site catalytic triad. In E. coli Clp protease, ser-111, his-136 and asp-185 form the catalytic triad. Swiss:P48254 has lost all of these active site residues and is therefore inactive. Swiss:P42379 contains two large in ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001270 | ClpA/B family | Family | |
IPR018368 | ClpA/B, conserved site 1 | Conserved Site | |
IPR041546 | ClpA/ClpB, AAA lid domain | Domain | |
IPR050130 | ATP-dependent Clp protease/Chaperone ClpA/ClpB | Family | |
IPR004176 | Clp, repeat (R) domain | Domain | |
IPR028299 | ClpA/B, conserved site 2 | Conserved Site | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR013461 | ATP-dependent Clp protease ATP-binding subunit ClpA | Family | |
IPR019489 | Clp ATPase, C-terminal | Domain | |
IPR036628 | Clp, N-terminal domain superfamily | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR001907 | ATP-dependent Clp protease proteolytic subunit | Family | |
IPR018215 | ClpP, Ser active site | Active Site | |
IPR023562 | Clp protease proteolytic subunit /Translocation-enhancing protein TepA | Family | |
IPR033135 | ClpP, histidine active site | Active Site |