6U4N
Solution structure of paxillin LIM4 in complex with kindlin-2 F0
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG3727 | e6u4nA1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: KOG3727 | ECOD (1.6) |
B | LIM_N | e6u4nB2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: LIM_N | ECOD (1.6) |
B | LIM_C_1 | e6u4nB1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: LIM_C_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (utative) |
B | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18124 | Kindlin-2 N-terminal domain (Kindlin_2_N) | Kindlin-2 N-terminal domain | This is the N-terminal domain (K2-N) of Kindlin-2 protein present in Homo sapiens. Kindlin-2 is a regulator for heterodimeric integrin adhesion receptors promotes integrin activation. Activation depends on binding of the N-terminal domain to the inte ... | Domain | |
PF00412 | LIM domain (LIM) | LIM domain | This family represents two copies of the LIM structural domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019748 | FERM central domain | Domain | |
IPR035963 | FERM superfamily, second domain | Homologous Superfamily | |
IPR001849 | Pleckstrin homology domain | Domain | |
IPR037837 | Kindlin/fermitin, PH domain | Domain | |
IPR040790 | Kindlin-2, N-terminal | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR019749 | Band 4.1 domain | Domain | |
IPR037843 | Kindlin/fermitin | Family | |
IPR001904 | Paxillin, Lim domain 4 | Domain | |
IPR047072 | Paxillin, Lim domain 2 | Domain | |
IPR001781 | Zinc finger, LIM-type | Domain | |
IPR047075 | Paxillin/TGFB1I1, LIM domain 1 | Domain | |
IPR051352 | Cell_Adhesion-Viral_Mod | Unknown |