6TJU
X-ray structure of C-terminal domain of human T-cell lymphotropic virus type 1 (HTLV-1)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAA] | IN_DBD_C | e6tjuAAA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: IN_DBD_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA] | PF00552 | Integrase DNA binding domain (IN_DBD_C) | Integrase DNA binding domain | Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain. The central domain is the catalytic domain Pfam:PF00665. This do ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
A [auth AAA] | IPR002156 | Ribonuclease H domain | Domain |
A [auth AAA] | IPR003308 | Integrase, N-terminal zinc-binding domain | Domain |
A [auth AAA] | IPR001584 | Integrase, catalytic core | Domain |
A [auth AAA] | IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily |
A [auth AAA] | IPR001037 | Integrase, C-terminal, retroviral | Domain |
A [auth AAA] | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily |
A [auth AAA] | IPR000477 | Reverse transcriptase domain | Domain |
A [auth AAA] | IPR036862 | Integrase, C-terminal domain superfamily, retroviral | Homologous Superfamily |
A [auth AAA] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |