6T6J
Crystal Structure of the C-terminal domain of the HIV-1 Integrase (subtype A2, mutant N254K, K340Q)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DNA-binding domain of retroviral integrase | 8096628 | 3000355 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | DNA-binding domain of retroviral integrase | 8096628 | 3000355 | SCOP2B (2022-06-29) |
C | SCOP2 Family | DNA-binding domain of retroviral integrase | 8096627 | 4001775 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | DNA-binding domain of retroviral integrase | 8096628 | 3000355 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00552 | e6t6jA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00552 | ECOD (1.6) |
B | PF00552 | e6t6jB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00552 | ECOD (1.6) |
C | PF00552 | e6t6jC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00552 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00552 | Integrase DNA binding domain (IN_DBD_C) | Integrase DNA binding domain | Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain. The central domain is the catalytic domain Pfam:PF00665. This do ... | Domain |