A model of the EIAV CA-SP hexamer (C6) from Gag-deltaMA spheres assembled at pH6
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Histone | e6t64C1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| B | Histone | e6t64B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| A | Histone | e6t64A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Gag polyprotein |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain | |
| IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily | |
| IPR014834 | Gag protein p15 | Domain | |
| IPR050195 | Primate lentivirus group Gag polyprotein-like | Domain | |
| IPR001878 | Zinc finger, CCHC-type | Domain | |
| IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily | |
| IPR010999 | Retroviral matrix protein | Homologous Superfamily | |
| IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily | |
| IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |














