Annotations: 6T5Z

Crystal structure of an AA10 LPMO from Photorhabdus luminescens

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6t5zc_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ],	SCOPe (2.08)
B	d6t5zb_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ],	SCOPe (2.08)
A	d6t5za_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Photorhabdus laumondii subsp. laumondii TTO1 ) [TaxId: 243265 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2 Family	E-set domains of sugar-utilizing enzymes	8095308	4007565	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	E set domains	8095309	3000070	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	E set domains	8095309	3000070	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	E set domains	8095309	3000070	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Flu_NP	e6t5zC1	A: beta barrels	X: jelly-roll	H: Helical bundle in flu nucleocapsid protein	T: Helical bundle in flu nucleocapsid protein	F: Flu_NP	ECOD (v294.2)
B	Flu_NP	e6t5zB1	A: beta barrels	X: jelly-roll	H: Helical bundle in flu nucleocapsid protein	T: Helical bundle in flu nucleocapsid protein	F: Flu_NP	ECOD (v294.2)
A	Flu_NP	e6t5zA1	A: beta barrels	X: jelly-roll	H: Helical bundle in flu nucleocapsid protein	T: Helical bundle in flu nucleocapsid protein	F: Flu_NP	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading (LPMO_10)	Lytic polysaccharide mono-oxygenase, cellulose-degrading	This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase [2], degrading cellulose. T ...	This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase [2], degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Chitin-binding type-4 domain-containing protein	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR004302	Cellulose/chitin-binding protein, N-terminal	Domain
A, B, C	IPR051024	GlcNAc and Chitin Interaction and Degradation	Family
A, B, C	IPR014756	Immunoglobulin E-set	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.