6S2U
Structure of the catalytic domain of T. thermophilus Rel in complex with AMP and ppGpp
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HD_4 | e6s2uA1 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: HD_4 | ECOD (1.6) |
A | RelA_SpoT | e6s2uA2 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: RelA_SpoT | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13328 | HD domain (HD_4) | HD domain | - | Family | |
PF04607 | Region found in RelA / SpoT proteins (RelA_SpoT) | Region found in RelA / SpoT proteins | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003607 | HD/PDEase domain | Domain | |
IPR012676 | TGS-like | Homologous Superfamily | |
IPR004095 | TGS | Domain | |
IPR045865 | ACT-like domain | Homologous Superfamily | |
IPR002912 | ACT domain | Domain | |
IPR033655 | RelA/SpoT, TGS domain | Domain | |
IPR004811 | RelA/SpoT family | Family | |
IPR043519 | Nucleotidyltransferase superfamily | Homologous Superfamily | |
IPR007685 | RelA/SpoT | Domain | |
IPR012675 | Beta-grasp domain superfamily | Homologous Superfamily | |
IPR045600 | RelA/SpoT, AH and RIS domains | Domain | |
IPR006674 | HD domain | Domain |