6RWY
Export apparatus core and inner rod of the Shigella type 3 secretion system
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
N | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | Type III secretion system needle-like | 8038584 | 3000649 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
N | PF09392 | e6rwyN1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
S | PF09392 | e6rwyS1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
U | PF09392 | e6rwyU1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
L | PF09392 | e6rwyL1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
M | PF09392 | e6rwyM1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
O | PF09392 | e6rwyO1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
P | PF09392 | e6rwyP1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
Q | PF09392 | e6rwyQ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
R | PF09392 | e6rwyR1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
T | PF09392 | e6rwyT1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
V | PF09392 | e6rwyV1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: PF09392 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F) | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF | - | Family | |
AA [auth e], W [auth a], X [auth b], Y [auth c], Z [auth d] | PF00813 | FliP family (FliP) | FliP family | - | Family |
BA [auth f] | PF01311 | Bacterial export proteins, family 1 (Bac_export_1) | Bacterial export proteins, family 1 | - | Family |
CA [auth g], DA [auth h], EA [auth i], FA [auth j], GA [auth k] | PF01313 | Bacterial export proteins, family 3 (Bac_export_3) | Bacterial export proteins, family 3 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Type III secretory pathway | FliP family |