Annotations: 6RW6

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EUF07624	e6rw6A1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07624	ECOD (1.6)
A	EUF07691	e6rw6A3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07691	ECOD (1.6)
A	EUF07697	e6rw6A5	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07697	ECOD (1.6)
A	EUF07706	e6rw6A8	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07706	ECOD (1.6)
A	EUF07707	e6rw6A7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07707	ECOD (1.6)
A	EUF07856	e6rw6A6	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: EUF07856	ECOD (1.6)
A	TcdA_pore	e6rw6A2	A: alpha bundles	X: TcA alpha pore-forming domain (From Topology)	H: TcA alpha pore-forming domain (From Topology)	T: TcA alpha pore-forming domain	F: TcdA_pore	ECOD (1.6)
A	VRP1	e6rw6A4	A: alpha complex topology	X: TcA alpha-helical shell domain (From Topology)	H: TcA alpha-helical shell domain (From Topology)	T: TcA alpha-helical shell domain	F: VRP1	ECOD (1.6)
B	EUF07624	e6rw6B1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07624	ECOD (1.6)
B	EUF07691	e6rw6B2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07691	ECOD (1.6)
B	EUF07697	e6rw6B6	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07697	ECOD (1.6)
B	EUF07706	e6rw6B7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07706	ECOD (1.6)
B	EUF07707	e6rw6B5	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07707	ECOD (1.6)
B	EUF07856	e6rw6B4	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: EUF07856	ECOD (1.6)
B	TcdA_pore	e6rw6B8	A: alpha bundles	X: TcA alpha pore-forming domain (From Topology)	H: TcA alpha pore-forming domain (From Topology)	T: TcA alpha pore-forming domain	F: TcdA_pore	ECOD (1.6)
B	VRP1	e6rw6B3	A: alpha complex topology	X: TcA alpha-helical shell domain (From Topology)	H: TcA alpha-helical shell domain (From Topology)	T: TcA alpha-helical shell domain	F: VRP1	ECOD (1.6)
C	EUF07624	e6rw6C1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07624	ECOD (1.6)
C	EUF07691	e6rw6C2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07691	ECOD (1.6)
C	EUF07697	e6rw6C5	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07697	ECOD (1.6)
C	EUF07706	e6rw6C3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07706	ECOD (1.6)
C	EUF07707	e6rw6C7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07707	ECOD (1.6)
C	EUF07856	e6rw6C4	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: EUF07856	ECOD (1.6)
C	TcdA_pore	e6rw6C8	A: alpha bundles	X: TcA alpha pore-forming domain (From Topology)	H: TcA alpha pore-forming domain (From Topology)	T: TcA alpha pore-forming domain	F: TcdA_pore	ECOD (1.6)
C	VRP1	e6rw6C6	A: alpha complex topology	X: TcA alpha-helical shell domain (From Topology)	H: TcA alpha-helical shell domain (From Topology)	T: TcA alpha-helical shell domain	F: VRP1	ECOD (1.6)
D	EUF07624	e6rw6D5	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07624	ECOD (1.6)
D	EUF07691	e6rw6D7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07691	ECOD (1.6)
D	EUF07697	e6rw6D1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07697	ECOD (1.6)
D	EUF07706	e6rw6D4	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07706	ECOD (1.6)
D	EUF07707	e6rw6D6	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07707	ECOD (1.6)
D	EUF07856	e6rw6D2	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: EUF07856	ECOD (1.6)
D	TcdA_pore	e6rw6D8	A: alpha bundles	X: TcA alpha pore-forming domain (From Topology)	H: TcA alpha pore-forming domain (From Topology)	T: TcA alpha pore-forming domain	F: TcdA_pore	ECOD (1.6)
D	VRP1	e6rw6D3	A: alpha complex topology	X: TcA alpha-helical shell domain (From Topology)	H: TcA alpha-helical shell domain (From Topology)	T: TcA alpha-helical shell domain	F: VRP1	ECOD (1.6)
E	EUF07624	e6rw6E8	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: EUF07624	ECOD (1.6)
E	EUF07691	e6rw6E3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07691	ECOD (1.6)
E	EUF07697	e6rw6E7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07697	ECOD (1.6)
E	EUF07706	e6rw6E2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07706	ECOD (1.6)
E	EUF07707	e6rw6E6	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07707	ECOD (1.6)
E	EUF07856	e6rw6E5	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: EUF07856	ECOD (1.6)
E	TcdA_pore	e6rw6E1	A: alpha bundles	X: TcA alpha pore-forming domain (From Topology)	H: TcA alpha pore-forming domain (From Topology)	T: TcA alpha pore-forming domain	F: TcdA_pore	ECOD (1.6)
E	VRP1	e6rw6E4	A: alpha complex topology	X: TcA alpha-helical shell domain (From Topology)	H: TcA alpha-helical shell domain (From Topology)	T: TcA alpha-helical shell domain	F: VRP1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF20220	ABC toxin N-terminal region (ABC_toxin_N)	ABC toxin N-terminal region	-	Family
A, B, C, D, E	PF18276	Tc toxin complex TcA C-terminal TcB-binding domain (TcA_TcB_BD)	Tc toxin complex TcA C-terminal TcB-binding domain	This domain is found in the C-terminal region of the Tc toxin TcA, present in Photorhabdus luminescens. Tc Toxin complexes bind to the cell surface, are endocytosed and perforate the host endosomal membrane by forming channels that translocate toxic ...	This domain is found in the C-terminal region of the Tc toxin TcA, present in Photorhabdus luminescens. Tc Toxin complexes bind to the cell surface, are endocytosed and perforate the host endosomal membrane by forming channels that translocate toxic enzymes into the host. This domain is responsible for binding to toxin TcB. Binding of TcA to TcB/TcC opens the beta-propeller gate [1].	Domain
A, B, C, D, E	PF18413	Neuraminidase-like domain (Neuraminidase)	Neuraminidase-like domain	-	Repeat
A, B, C, D, E	PF21968	TcdA1, receptor binding domain (TcdA1_RBD_3)	TcdA1, receptor binding domain	This domain is found in TcdA1 from Photorhabdus luminescens and similar sequences from proteobacteria. TcdA1 is one of the three subunits of the Tc toxins. TcdA1 acts as an injecting device responsible for translocating the actual toxic component int ...	This domain is found in TcdA1 from Photorhabdus luminescens and similar sequences from proteobacteria. TcdA1 is one of the three subunits of the Tc toxins. TcdA1 acts as an injecting device responsible for translocating the actual toxic component into host cells. TcA has four receptor-binding domains. This domain is one of 4 receptor binding domains found in TcA. All four domains have an immunoglobulin (Ig)-like beta-sandwich fold of two sheets with antiparallel beta-strands [1,2].	Domain
A, B, C, D, E	PF21963	TcdA1, receptor binding domain (TcdA1_RBD_2)	TcdA1, receptor binding domain	This domain is found in TcdA1 from Photorhabdus luminescens and similar sequences from gammaproteobacteria. TcdA1 is one of the three subunits of the Tc toxins. TcdA1 acts as an injecting device responsible for translocating the actual toxic componen ...	This domain is found in TcdA1 from Photorhabdus luminescens and similar sequences from gammaproteobacteria. TcdA1 is one of the three subunits of the Tc toxins. TcdA1 acts as an injecting device responsible for translocating the actual toxic component into host cells. TcA has four receptor-binding domains. This domain is one of 4 receptor binding domains found in TcA. All four domains have an immunoglobulin (Ig)-like beta-sandwich fold of two sheets with antiparallel beta-strands [1,2].	Domain
A, B, C, D, E	PF18518	TcA receptor binding domain (TcA_RBD)	TcA receptor binding domain	Tc toxin complexes are virulence factors of many bacteria such as the plague pathogen Yersinia pestis. Tc toxins are composed of TcA, TcB and TcC subunits. TcA forms a large bell-shaped pentameric structure and enters the membrane like a syringe, for ...	Tc toxin complexes are virulence factors of many bacteria such as the plague pathogen Yersinia pestis. Tc toxins are composed of TcA, TcB and TcC subunits. TcA forms a large bell-shaped pentameric structure and enters the membrane like a syringe, forming a translocation channel through which the cytotoxic domain is probably transported into the cytoplasm. TcA has four receptor-binding domains. This domain is one of 4 receptor binding domains found in TcA. All four domains have an immunoglobulin (Ig)-like beta-sandwich fold of two sheets with antiparallel beta-strands. The domains are structurally reminiscent of the receptor-binding domains of the diphtheria and anthrax toxins [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	TcdA1	identical protein binding protein binding binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR018003	Insecticidal toxin complex/plasmid virulence protein	Family
A, B, C, D, E	IPR054141	TcdA1, receptor binding domain 2	Domain
A, B, C, D, E	IPR041079	Neuraminidase-like domain	Domain
A, B, C, D, E	IPR040840	Tc toxin complex TcA, C-terminal TcB-binding domain	Domain
A, B, C, D, E	IPR046839	ABC toxin, N-terminal domain	Domain
A, B, C, D, E	IPR041568	TcA receptor binding domain	Domain
A, B, C, D, E	IPR054144	TcdA1, receptor binding domain 1	Domain