6RGL
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in contracted state
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Phage_sheath_1C | e6rglB2 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: gpW/gp25-like (From Topology) | T: gpW/gp25-like | F: Phage_sheath_1C | ECOD (1.6) |
A [auth B] | Phage_sheath_1 | e6rglB1 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Domain III of tail sheath protein Gp18 (From Topology) | T: Domain III of tail sheath protein Gp18 | F: Phage_sheath_1 | ECOD (1.6) |
B [auth A] | Phage_sheath_1C | e6rglA2 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: gpW/gp25-like (From Topology) | T: gpW/gp25-like | F: Phage_sheath_1C | ECOD (1.6) |
B [auth A] | Phage_sheath_1 | e6rglA1 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Domain III of tail sheath protein Gp18 (From Topology) | T: Domain III of tail sheath protein Gp18 | F: Phage_sheath_1 | ECOD (1.6) |
C | Phage_sheath_1C | e6rglC2 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: gpW/gp25-like (From Topology) | T: gpW/gp25-like | F: Phage_sheath_1C | ECOD (1.6) |
C | Phage_sheath_1 | e6rglC1 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Domain III of tail sheath protein Gp18 (From Topology) | T: Domain III of tail sheath protein Gp18 | F: Phage_sheath_1 | ECOD (1.6) |
D | Phage_sheath_1C | e6rglD2 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: gpW/gp25-like (From Topology) | T: gpW/gp25-like | F: Phage_sheath_1C | ECOD (1.6) |
D | Phage_sheath_1 | e6rglD1 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Domain III of tail sheath protein Gp18 (From Topology) | T: Domain III of tail sheath protein Gp18 | F: Phage_sheath_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF17482 | Phage tail sheath C-terminal domain (Phage_sheath_1C) | Phage tail sheath C-terminal domain | This entry represents the C-terminal domain in a variety of phage tail sheath proteins [4]. | Domain |
A [auth B], B [auth A] | PF04984 | Phage tail sheath protein subtilisin-like domain (Phage_sheath_1) | Phage tail sheath protein subtilisin-like domain | This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure. | Domain |
PF17482 | Phage tail sheath C-terminal domain (Phage_sheath_1C) | Phage tail sheath C-terminal domain | This entry represents the C-terminal domain in a variety of phage tail sheath proteins [4]. | Domain | |