6R5U
The crystal structure of Glycoside Hydrolase BglX inactive mutant from P. aeruginosa in complex with laminaritriose
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Fn3-like | e6r5uB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Fn3-like | ECOD (1.6) |
A [auth B] | Glyco_hydro_3 | e6r5uB3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
A [auth B] | Glyco_hydro_3_C | e6r5uB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Beta-D-glucan exohydrolase, C-terminal domain (From Topology) | T: Beta-D-glucan exohydrolase, C-terminal domain | F: Glyco_hydro_3_C | ECOD (1.6) |
B [auth A] | Fn3-like | e6r5uA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Fn3-like | ECOD (1.6) |
B [auth A] | Glyco_hydro_3 | e6r5uA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
B [auth A] | Glyco_hydro_3_C | e6r5uA3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Beta-D-glucan exohydrolase, C-terminal domain (From Topology) | T: Beta-D-glucan exohydrolase, C-terminal domain | F: Glyco_hydro_3_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
A [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
B [auth A] | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
B [auth A] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00933 | Glycosyl hydrolase family 3 N terminal domain (Glyco_hydro_3) | Glycosyl hydrolase family 3 N terminal domain | - | Domain |
A [auth B], B [auth A] | PF01915 | Glycosyl hydrolase family 3 C-terminal domain (Glyco_hydro_3_C) | Glycosyl hydrolase family 3 C-terminal domain | This domain is involved in catalysis and may be involved in binding beta-glucan [1]. This domain is found associated with Pfam:PF00933. | Domain |
A [auth B], B [auth A] | PF14310 | Fibronectin type III-like domain (Fn3-like) | Fibronectin type III-like domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth A] | Periplasmic beta-glucosidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR001764 | Glycoside hydrolase, family 3, N-terminal | Domain |
A [auth B], B [auth A] | IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth B], B [auth A] | IPR019800 | Glycoside hydrolase, family 3, active site | Active Site |
A [auth B], B [auth A] | IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR051915 | Cellulose Degradation Glycosyl Hydrolase 3 | Family |
A [auth B], B [auth A] | IPR026891 | Fibronectin type III-like domain | Domain |
A [auth B], B [auth A] | IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR002772 | Glycoside hydrolase family 3 C-terminal domain | Domain |