6QX8
Influenza A virus (A/NT/60/1968) polymerase dimer of heterotrimer in complex with 5' cRNA promoter
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Flu_PB2_2nd,Flu_PB2_3rd | e6qx8C1 | A: a+b two layers | X: a+b domain in PB2 (From Topology) | H: a+b domain in PB2 (From Topology) | T: a+b domain in PB2 | F: Flu_PB2_2nd,Flu_PB2_3rd | ECOD (1.6) |
G | Flu_PB2_2nd,Flu_PB2_3rd | e6qx8G1 | A: a+b two layers | X: a+b domain in PB2 (From Topology) | H: a+b domain in PB2 (From Topology) | T: a+b domain in PB2 | F: Flu_PB2_2nd,Flu_PB2_3rd | ECOD (1.6) |
B | Flu_PB1_2nd | e6qx8B2 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: Flu_PB1_2nd | ECOD (1.6) |
B | Flu_PB1_1st | e6qx8B1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: Flu_PB1_1st | ECOD (1.6) |
F | Flu_PB1_2nd | e6qx8F2 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: Flu_PB1_2nd | ECOD (1.6) |
F | Flu_PB1_1st | e6qx8F1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: Flu_PB1_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20949 | Influenza RNA polymerase PB2 middle domain (Flu_PB2_3rd) | Influenza RNA polymerase PB2 middle domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain | |
PF00602 | Influenza RNA-dependent RNA polymerase subunit PB1 (Flu_PB1) | Influenza RNA-dependent RNA polymerase subunit PB1 | - | Family | |