6QIM

Structure of AtPIP2;4

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Aquaporin-like	8095581	3000508	SCOP2B (2022-06-29)
B	SCOP2 Family	Aquaporin-like	8095580	4003025	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Aquaporin-like	8095581	3000508	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MIP	e6qimA1	A: alpha complex topology	X: Aquaporin-like (From Topology)	H: Aquaporin-like (From Topology)	T: Aquaporin-like	F: MIP	ECOD (1.6)
B	MIP	e6qimB1	A: alpha complex topology	X: Aquaporin-like (From Topology)	H: Aquaporin-like (From Topology)	T: Aquaporin-like	F: MIP	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (utative)
B	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Probable aquaporin PIP2-4	passive transmembrane transporter activity water transmembrane transporter activity inorganic molecular entity transmembrane transporter activity channel activity transporter activity transmembrane transporter activity water channel activity	multicellular organismal process plant epidermal cell differentiation cellular developmental process developmental growth plant epidermis development cell development cell growth multicellular organism development root hair cell development cell differentiation anatomical structure development cell maturation root development trichoblast differentiation multicellular organismal process plant epidermal cell differentiation cellular developmental process developmental growth plant epidermis development cell development cell growth multicellular organism development root hair cell development cell differentiation anatomical structure development cell maturation root development trichoblast differentiation system development developmental process root hair elongation plant organ development developmental cell growth root morphogenesis root epidermal cell differentiation growth root hair cell differentiation developmental maturation tissue development developmental growth involved in morphogenesis plant organ morphogenesis anatomical structure morphogenesis trichoblast maturation anatomical structure maturation cellular process root system development transmembrane transport localization hydrogen peroxide transmembrane transport transport establishment of localization	cell periphery plasma membrane membrane cellular anatomical entity cell-cell junction symplast anchoring junction cell junction plasmodesma

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR022357	Major intrinsic protein, conserved site	Conserved Site
A, B	IPR034294	Aquaporin transporter	Family
A, B	IPR023271	Aquaporin-like	Homologous Superfamily
A, B	IPR000425	Major intrinsic protein	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Transmembrane	Alpha-helical polytopic	Major Intrinsic Protein (MIP)/FNT superfamily	Major intrinsic protein (MIP) family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Channels: Aquaporins and Glyceroporins	PIP2;4 plant aquaporin

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.