6PXI
The crystal structure of a singly capped HslUV complex with an axial pore plug and a HslU E257Q mutation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036886 | 3000131 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036886 | 3000131 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036886 | 3000131 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036886 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00227 | e6pxiA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
B | PF00227 | e6pxiB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
C | PF00227 | e6pxiC1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
D | PF00227 | e6pxiD1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
E | F_UNCLASSIFIED | e6pxiE2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF07724,PF07728 | e6pxiE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724,PF07728 | ECOD (1.6) |
F | F_UNCLASSIFIED | e6pxiF2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF07724,PF07728 | e6pxiF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724,PF07728 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
IPR023333 | Proteasome B-type subunit | Family | |
IPR001353 | Proteasome, subunit alpha/beta | Family | |
IPR022281 | ATP-dependent protease, HslV subunit | Family | |
IPR050052 | ATP-dependent Clp protease ATP-binding subunit ClpX | Family | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR004491 | Heat shock protein HslU | Family | |
IPR019489 | Clp ATPase, C-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |