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 6PWK | pdb_00006pwk

Vibrio cholerae LapD S helix-GGDEF-EAL (bound to c-di-GMP)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRibosomal_S20pe6pwkB1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: Ribosomal_S20pECOD (v295.2)
ARibosomal_S20pe6pwkA1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: Ribosomal_S20pECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.270 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Reverse transcriptase/Diguanylate cyclase domainCATH (utative)
A3.20.20.450 Alpha Beta Alpha-Beta Barrel TIM Barrel EAL domainCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
GGDEF and EAL domain-containing protein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000160GGDEF domainDomain
A, B
IPR003660HAMP domainDomain
A, B
IPR042461LapD/MoxY periplasmic domain, C-terminalHomologous Superfamily
A, B
IPR032244LapD/MoxY, periplasmic domainDomain
A, B
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A, B
IPR001633EAL domainDomain
A, B
IPR035919EAL domain superfamilyHomologous Superfamily
A, B
IPR029787Nucleotide cyclaseHomologous Superfamily