6PM7
The structure of the triclinic crystal form of beef liver catalase at 1.85 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6pm7a_ | Multi-domain proteins (alpha and beta) | Heme-dependent catalase-like | Heme-dependent catalase-like | Heme-dependent catalases | automated matches | Bovine (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
B | d6pm7b_ | Multi-domain proteins (alpha and beta) | Heme-dependent catalase-like | Heme-dependent catalase-like | Heme-dependent catalases | automated matches | Bovine (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00199 | e6pm7A1 | A: beta barrels | X: Barrel domain in heme-dependent catalases (From Topology) | H: Barrel domain in heme-dependent catalases (From Topology) | T: Barrel domain in heme-dependent catalases | F: PF00199 | ECOD (1.6) |
A | PF00199 | e6pm7A3 | A: alpha bundles | X: First alpha-helical domain in heme-dependent catalases (From Topology) | H: First alpha-helical domain in heme-dependent catalases (From Topology) | T: First alpha-helical domain in heme-dependent catalases | F: PF00199 | ECOD (1.6) |
A | PF06628 | e6pm7A2 | A: alpha bundles | X: Second alpha-helical domain in heme-dependent catalases (From Topology) | H: Second alpha-helical domain in heme-dependent catalases (From Topology) | T: Second alpha-helical domain in heme-dependent catalases | F: PF06628 | ECOD (1.6) |
B | PF00199 | e6pm7B1 | A: beta barrels | X: Barrel domain in heme-dependent catalases (From Topology) | H: Barrel domain in heme-dependent catalases (From Topology) | T: Barrel domain in heme-dependent catalases | F: PF00199 | ECOD (1.6) |
B | PF00199 | e6pm7B2 | A: alpha bundles | X: First alpha-helical domain in heme-dependent catalases (From Topology) | H: First alpha-helical domain in heme-dependent catalases (From Topology) | T: First alpha-helical domain in heme-dependent catalases | F: PF00199 | ECOD (1.6) |
B | PF06628 | e6pm7B3 | A: alpha bundles | X: Second alpha-helical domain in heme-dependent catalases (From Topology) | H: Second alpha-helical domain in heme-dependent catalases (From Topology) | T: Second alpha-helical domain in heme-dependent catalases | F: PF06628 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 4.10.91.20 | Few Secondary Structures | Irregular | Cytochrome C Oxidase | Chain J | CATH (utative) |
A | 2.40.180.10 | Mainly Beta | Beta Barrel | Catalase HpII, Chain A, domain 1 | Catalase core domain | CATH (utative) |
A | 1.20.1370.60 | Mainly Alpha | Up-down Bundle | Hemocyanin, N-terminal domain | CATH (utative) | |
B | 4.10.91.20 | Few Secondary Structures | Irregular | Cytochrome C Oxidase | Chain J | CATH (utative) |
B | 2.40.180.10 | Mainly Beta | Beta Barrel | Catalase HpII, Chain A, domain 1 | Catalase core domain | CATH (utative) |
B | 1.20.1370.60 | Mainly Alpha | Up-down Bundle | Hemocyanin, N-terminal domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06628 | Catalase-related immune-responsive (Catalase-rel) | Catalase-related immune-responsive | - | Family | |
PF00199 | Catalase (Catalase) | Catalase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024708 | Catalase active site | Active Site | |
IPR010582 | Catalase immune-responsive domain | Domain | |
IPR002226 | Catalase haem-binding site | Binding Site | |
IPR020835 | Catalase superfamily | Homologous Superfamily | |
IPR024711 | Catalase, mono-functional, haem-containing, clades 1 and 3 | Family | |
IPR011614 | Catalase core domain | Domain | |
IPR018028 | Catalase, mono-functional, haem-containing | Family | |
IPR040333 | Catalase, clade 3 | Family |