Crystal Structure of Antibody P-p1f1 in Complex with eOD-GT8


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth D]ATP-synte6p8nD1 A: beta barrelsX: jelly-rollH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.2)
C [auth L]ATP-synte6p8nL1 A: beta barrelsX: jelly-rollH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.2)
E [auth B]ATP-synte6p8nB1 A: beta barrelsX: jelly-rollH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.2)
B [auth H]ATP-synte6p8nH1 A: beta barrelsX: jelly-rollH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.2)
D [auth A]ATP-synte6p8nA1 A: beta barrelsX: jelly-rollH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.2)
A [auth C]ATP-synte6p8nC1 A: beta barrelsX: jelly-rollH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F [auth D]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
E [auth B]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
C [auth L],
F [auth D]
Fab P-p1f1, anti-gp120 CD4-binding site (CD4bs) [HIV-1], broadly L-KAPPA Homo sapiens (human) IGKV8-30*01, IGKJ1*01, IGKJ2*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202617-0)
B [auth H],
E [auth B]
Fab P-p1f1, anti-gp120 CD4-binding site (CD4bs) [HIV-1], broadly VH-CH1 Homo sapiens (human) IGHV1-2*02, IGHJ1*01, IGHG1*03, IGHG1*08, IGHG1*06 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202617-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth L],
F [auth D]
Light ChainIGKV8 Kappaenv outer domain eod-gt8SAbDab (2026-05-08)
B [auth H],
E [auth B]
Heavy ChainIGHV1 -env outer domain eod-gt8SAbDab (2026-05-08)