6P3J
Crystal structure of LigU
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6p3ja1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | automated matches | automated matches | (Novosphingobium sp. KA1 ) [TaxId: 164608 ], | SCOPe (2.08) |
A | d6p3ja3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Novosphingobium sp. KA1 ) [TaxId: 164608 ], | SCOPe (2.08) |
B | d6p3jb1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | automated matches | automated matches | (Novosphingobium sp. KA1 ) [TaxId: 164608 ], | SCOPe (2.08) |
B | d6p3jb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Novosphingobium sp. KA1 ) [TaxId: 164608 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PrpF | e6p3jA2 | A: a+b complex topology | X: Diaminopimelate epimerase-like (From Topology) | H: Diaminopimelate epimerase-like (From Topology) | T: Diaminopimelate epimerase-like | F: PrpF | ECOD (1.6) |
B | PrpF | e6p3jB1 | A: a+b complex topology | X: Diaminopimelate epimerase-like (From Topology) | H: Diaminopimelate epimerase-like (From Topology) | T: Diaminopimelate epimerase-like | F: PrpF | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (utative) |
B | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04303 | PrpF protein (PrpF) | PrpF protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
(4E)-oxalomesaconate Delta-isomerase | - |