Skip to main content

 6OZI | pdb_00006ozi

Crystal structure of Ciona intestinalis (Ci) Endonuclease V (D234N) in complex with a 23mer DNA containing an inosine followed by a ribo-adenosine

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BV-sete6oziB1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: V-setECOD (v295.2)
ATSP_1e6oziA1 A: alpha arraysX: Nat/IvyH: NtnT: Proteasome subunitsF: TSP_1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.2170.10 Alpha Beta 2-Layer Sandwich archaeoglobus fulgidus dsm 4304 fold archaeoglobus fulgidus dsm 4304 superfamilyCATH (utative)
A3.30.2170.10 Alpha Beta 2-Layer Sandwich archaeoglobus fulgidus dsm 4304 fold archaeoglobus fulgidus dsm 4304 superfamilyCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF04493Endonuclease V (Endonuclease_5)Endonuclease VEndonuclease V is specific for single-stranded DNA or for duplex DNA that contains uracil or that is damaged by a variety of agents [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
DNA/RNA (23-MER)---
A, B
endonuclease V isoform X2 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR007581Endonuclease VFamily