6OUC

Asymmetric focsued reconstruction of human norovirus GII.2 Snow Mountain Virus strain VLP asymmetric unit in T=1 symmetry

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6ouca_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses automated matches automated matches (Snow Mountain virus ) [TaxId: 52276 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACalici_coat_C_Ne6oucA1 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_NECOD (1.6)
ACalici_coat_C_Ce6oucA2 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_CECOD (1.6)
ARhv_4e6oucA3 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Rhv_4ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08435Calicivirus coat protein C-terminal (Calici_coat_C)Calicivirus coat protein C-terminal- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR029053Viral coat protein subunitHomologous Superfamily
IPR004005Calicivirus coat proteinDomain
IPR013643Calicivirus coat protein C-terminalDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain