Annotations: 6OMC

capsid of T5 virion

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
M	Cas9_PI2	e6omcM1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
L	Cas9_PI2	e6omcL1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
K	Cas9_PI2	e6omcK1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
J	Cas9_PI2	e6omcJ1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
I	Cas9_PI2	e6omcI1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
H	Cas9_PI2	e6omcH1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
G	Cas9_PI2	e6omcG1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
F	Cas9_PI2	e6omcF1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
E	Cas9_PI2	e6omcE1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
D	Cas9_PI2	e6omcD1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
C	Cas9_PI2	e6omcC1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
B	Cas9_PI2	e6omcB1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)
A	Cas9_PI2	e6omcA1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: Cas9_PI2	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	PF05065	Phage capsid family (Phage_capsid)	Phage capsid family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	Major capsid protein	-	symbiont-mediated perturbation of host defense response biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response symbiont-mediated response to host defenses response to external stimulus biological process involved in interaction with host response to biotic stimulus biological process involved in symbiotic interaction symbiont-mediated perturbation of host process response to host immune response symbiont-mediated evasion of host immune response response to host symbiont-mediated perturbation of host defense response biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response symbiont-mediated response to host defenses response to external stimulus biological process involved in interaction with host response to biotic stimulus biological process involved in symbiotic interaction symbiont-mediated perturbation of host process response to host immune response symbiont-mediated evasion of host immune response response to host response to external biotic stimulus modulation of process of another organism	protein-containing complex viral capsid virion component viral scaffold icosahedral viral capsid T=13 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	IPR054612	Phage capsid-like, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	IPR024455	Phage capsid	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6OMC | pdb_00006omc

capsid of T5 virion

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage