6OLJ
CryoEM structure of PilB from Geobacter metallireducens: C2ccocco conformation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | T2SSE | e6oljC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: T2SSE | ECOD (1.6) |
B [auth A] | T2SSE | e6oljA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: T2SSE | ECOD (1.6) |
C [auth B] | T2SSE | e6oljB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: T2SSE | ECOD (1.6) |
D | T2SSE | e6oljD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: T2SSE | ECOD (1.6) |
E | T2SSE | e6oljE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: T2SSE | ECOD (1.6) |
F | T2SSE | e6oljF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: T2SSE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00437 | Type II/IV secretion system protein (T2SSE) | Type II/IV secretion system protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001482 | Type II/IV secretion system domain | Domain | |
IPR013374 | ATPase, type IV, pilus assembly, PilB | Family | |
IPR037257 | Type II secretion system protein GspE, N-terminal superfamily | Homologous Superfamily | |
IPR007831 | Type II secretion system protein GspE, N-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |