Structure of the PCV2d virus-like particle
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| ZA [auth Ap] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| Z [auth AP] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| YA [auth Ao] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| Y [auth AO] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| XA [auth An] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| X [auth AN] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| WA [auth Am] | SCOP2 Family | Circovirus-like VP | 8094354 | 4006869 | SCOP2 (2022-06-29) |
| WA [auth Am] | SCOP2 Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2 (2022-06-29) |
| W [auth AM] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| VA [auth Al] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| V [auth AL] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| UA [auth Ak] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| U [auth AK] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| TA [auth Aj] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| T [auth AJ] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| SA [auth Ai] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| S [auth AI] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| RA [auth Ah] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| R [auth AH] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| QA [auth Ag] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| Q [auth AG] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| PA [auth Af] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| P [auth AF] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| OA [auth Ae] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| O [auth AE] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| NA [auth Ad] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| N [auth AD] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| MA [auth Ac] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| M [auth AC] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| LA [auth Ab] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| L [auth AB] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| KA [auth Aa] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| K [auth AA] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| JA [auth AZ] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| J [auth A9] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| IA [auth AY] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| I [auth A8] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| HB [auth Ax] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| HA [auth AX] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| H [auth A7] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| GB [auth Aw] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| GA [auth AW] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| G [auth A6] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| FB [auth Av] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| FA [auth AV] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| F [auth A5] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| EB [auth Au] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| EA [auth AU] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| E [auth A4] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| DB [auth At] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| DA [auth AT] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| D [auth A3] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| CB [auth As] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| CA [auth AS] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| C [auth A2] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| BB [auth Ar] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| BA [auth AR] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| B [auth A1] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| AB [auth Aq] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| AA [auth AQ] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
| A [auth A0] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8094355 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| ZA [auth Ap] | V-set | e6olaAp1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| Z [auth AP] | V-set | e6olaAP1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| YA [auth Ao] | V-set | e6olaAo1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| Y [auth AO] | V-set | e6olaAO1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| XA [auth An] | V-set | e6olaAn1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| X [auth AN] | V-set | e6olaAN1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| WA [auth Am] | V-set | e6olaAm1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| W [auth AM] | V-set | e6olaAM1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| VA [auth Al] | V-set | e6olaAl1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| V [auth AL] | V-set | e6olaAL1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| UA [auth Ak] | V-set | e6olaAk1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| U [auth AK] | V-set | e6olaAK1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| TA [auth Aj] | V-set | e6olaAj1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| T [auth AJ] | V-set | e6olaAJ1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| SA [auth Ai] | V-set | e6olaAi1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| S [auth AI] | V-set | e6olaAI1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| RA [auth Ah] | V-set | e6olaAh1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| R [auth AH] | V-set | e6olaAH1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| QA [auth Ag] | V-set | e6olaAg1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| Q [auth AG] | V-set | e6olaAG1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| PA [auth Af] | V-set | e6olaAf1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| P [auth AF] | V-set | e6olaAF1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| OA [auth Ae] | V-set | e6olaAe1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| O [auth AE] | V-set | e6olaAE1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| NA [auth Ad] | V-set | e6olaAd1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| N [auth AD] | V-set | e6olaAD1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| MA [auth Ac] | V-set | e6olaAc1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| M [auth AC] | V-set | e6olaAC1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| LA [auth Ab] | V-set | e6olaAb1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| L [auth AB] | V-set | e6olaAB1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| KA [auth Aa] | V-set | e6olaAa1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| K [auth AA] | V-set | e6olaAA1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| JA [auth AZ] | V-set | e6olaAZ1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| J [auth A9] | V-set | e6olaA91 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| IA [auth AY] | V-set | e6olaAY1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| I [auth A8] | V-set | e6olaA81 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| HB [auth Ax] | V-set | e6olaAx1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| HA [auth AX] | V-set | e6olaAX1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| H [auth A7] | V-set | e6olaA71 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| GB [auth Aw] | V-set | e6olaAw1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| GA [auth AW] | V-set | e6olaAW1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| G [auth A6] | V-set | e6olaA61 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| FB [auth Av] | V-set | e6olaAv1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| FA [auth AV] | V-set | e6olaAV1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| F [auth A5] | V-set | e6olaA51 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| EB [auth Au] | V-set | e6olaAu1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| EA [auth AU] | V-set | e6olaAU1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| E [auth A4] | V-set | e6olaA41 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| DB [auth At] | V-set | e6olaAt1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| DA [auth AT] | V-set | e6olaAT1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| D [auth A3] | V-set | e6olaA31 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| CB [auth As] | V-set | e6olaAs1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| CA [auth AS] | V-set | e6olaAS1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| C [auth A2] | V-set | e6olaA21 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| BB [auth Ar] | V-set | e6olaAr1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| BA [auth AR] | V-set | e6olaAR1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| B [auth A1] | V-set | e6olaA11 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| AB [auth Aq] | V-set | e6olaAq1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| AA [auth AQ] | V-set | e6olaAQ1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: V-set | ECOD (v294.2) |
| A [auth A0] | Peptidase_M13,Peptidase_M13_N | e6olaA01 | A: beta barrels | X: HAD domain-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: Peptidase_M13,Peptidase_M13_N | ECOD (v294.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038652 | Circovirus capsid superfamily | Homologous Superfamily | |
| IPR003383 | Circovirus capsid protein | Family |














