6OKC
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C12-crypto Acyl Carrier Protein, AcpP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Thiolase-like | 8037440 | 3000122 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Thiolase-like | 8037437 | 3000122 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Thiolase-like | 8037437 | 3000122 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Thiolase-like | 8037440 | 3000122 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ACP-like | 8040084 | 3001805 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ACP-like | 8040084 | 3001805 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00109 | e6okcA1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00109 | ECOD (1.6) |
A | PF02801 | e6okcA2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02801 | ECOD (1.6) |
B | PF00109 | e6okcB1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00109 | ECOD (1.6) |
B | PF02801 | e6okcB2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02801 | ECOD (1.6) |
C | PF00550 | e6okcC1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PF00550 | ECOD (1.6) |
D | PF00550 | e6okcD1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PF00550 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (utative) |
B | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02801 | Beta-ketoacyl synthase, C-terminal domain (Ketoacyl-synt_C) | Beta-ketoacyl synthase, C-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. | Domain | |
PF00109 | Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt) | Beta-ketoacyl synthase, N-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains m ... | Domain | |
PF00550 | Phosphopantetheine attachment site (PP-binding) | Phosphopantetheine attachment site | A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016039 | Thiolase-like | Homologous Superfamily | |
IPR014031 | Beta-ketoacyl synthase, C-terminal | Domain | |
IPR000794 | Beta-ketoacyl synthase | Family | |
IPR018201 | Beta-ketoacyl synthase, active site | Active Site | |
IPR014030 | Beta-ketoacyl synthase-like, N-terminal | Domain | |
IPR020841 | Polyketide synthase, beta-ketoacyl synthase domain | Domain | |
IPR006162 | Phosphopantetheine attachment site | PTM | |
IPR009081 | Phosphopantetheine binding ACP domain | Domain | |
IPR036736 | ACP-like superfamily | Homologous Superfamily | |
IPR003231 | Acyl carrier protein | Family |