6OEL
Engineered Fab bound to IL-4 receptor
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 4-helical cytokines | 8037758 | 3001717 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055519 | 3002063 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055135 | 3002063 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Fibronectin type III | 8055179 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IL4 | e6oelA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL4 | ECOD (1.6) |
B | IL4Ra_N | e6oelB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: IL4Ra_N | ECOD (1.6) |
B | fn3_6 | e6oelB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
C | fn3_6 | e6oelC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
C | IL6Ra-bind_1 | e6oelC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: IL6Ra-bind_1 | ECOD (1.6) |
D [auth H] | V-set_8 | e6oelH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
D [auth H] | C1-set_1 | e6oelH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
E [auth L] | C1-set_4 | e6oelL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
E [auth L] | V-set | e6oelL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (utative) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
D [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
E [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
Engineered Interleukin-4, RGA variant | IL4 | Homo sapiens (human) | IL4*01 | R-LIKE-DOMAIN IL4 (Pr25-153) | RPI | IL4 | IMGT (202432-0) | |
Interleukin-4 receptor subunit alpha | 2F-DOMAIN | Homo sapiens (human) | IL4R*01 | F-LIKE-DOMAIN F-DOMAIN | RPI | 2F-DOMAIN | IMGT (202432-0) | |
Cytokine receptor common subunit gamma | 2F-DOMAIN | Homo sapiens (human) | IL2RG*01 | F-LIKE-DOMAIN F-DOMAIN | RPI | 2F-DOMAIN | IMGT (202432-0) | |
D [auth H] | Antibody Fab Fragment | VH-CH1 | Homo sapiens (human) | IGHV6-1*01, IGHV6-1*02, IGHJ1*01, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05, IGHG1*12, IGHG1*14, IGHG1*13, IGHG1*09, IGHG1*10, IGHG1*07, IGHG1*11 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202432-0) |
E [auth L] | Antibody Fab Fragment | L-KAPPA | Homo sapiens (human) | IGKV1-39*01, IGKV1D-39*01, IGKJ1*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202432-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
D [auth H] | Heavy Chain | IGHV6 | - | interleukin-4 receptor subunit alpha | cytokine receptor common subunit gamma | SAbDab (2024-08-16) |
E [auth L] | Light Chain | IGKV1 | Kappa | interleukin-4 receptor subunit alpha | cytokine receptor common subunit gamma | SAbDab (2024-08-16) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09238 | Interleukin-4 receptor alpha chain, N-terminal (IL4Ra_N) | Interleukin-4 receptor alpha chain, N-terminal | Members of this family are related in overall topology to fibronectin type III modules and fold into a sandwich comprising seven antiparallel beta sheets arranged in a three-strand and a four-strand beta-pleated sheet. They are required for binding o ... | Domain | |
PF22012 | Cytokine receptor-like factor 2, domain 1 (TSLPR_D1) | Cytokine receptor-like factor 2, domain 1 | Cytokine receptor-like factor 2 also known as TSLPR is a receptor for thymic stromal lymphopoietin. It contains two ectodomains with Ig-like topology. This family represents the first of these domains. It also includes domains of interleukin-13 recep ... | Domain | |
PF21605 | Cytokine receptor-like factor 2-like, D2 domain (CRLF2-like_D2) | Cytokine receptor-like factor 2-like, D2 domain | CRLF2 is a receptor for thymic stromal lymphopoietin (TSLP). It forms a functional complex with TSLP and IL7R which is capable of stimulating cell proliferation through activation of STAT3 and STAT5. CRFL2 is implicated in the development of the hema ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018096 | Interleukin-4/interleukin-13, conserved site | Conserved Site | |
IPR001325 | Interleukin-4/interleukin-13 | Family | |
IPR002354 | Interleukin-4 | Family | |
IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily | |
IPR003531 | Short hematopoietin receptor, family 1, conserved site | Conserved Site | |
IPR003961 | Fibronectin type III | Domain | |
IPR015319 | Interleukin-4 receptor alpha, N-terminal | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily | |
IPR048648 | Cytokine receptor-like factor 2-like, D2 domain | Domain | |
IPR003531 | Short hematopoietin receptor, family 1, conserved site | Conserved Site | |
IPR003961 | Fibronectin type III | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR048651 | Cytokine receptor-like factor 2-like, D1 domain | Domain | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |