6N0G

Cryo-EM structure of the HO BMC shell: subregion classified for BMC-T: TS-TDTDTD


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
W [auth JB]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
AA [auth JF]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
BA [auth KA]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
CA [auth KB]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
D [auth GA]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
DA [auth KC]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
E [auth GB]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
EA [auth KD]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
F [auth GC]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
FA [auth KE]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
G [auth GD]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
GA [auth KF]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
H [auth GE]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
HA [auth LA]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
I [auth GF]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
IA [auth LB]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
J [auth HA]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
JA [auth LC]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
K [auth HB]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
KA [auth LD]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
L [auth HC]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
LA [auth LE]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
M [auth HD]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
MA [auth LF]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
N [auth HE]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
O [auth HF]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
P [auth IA]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
Q [auth IB]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
R [auth IC]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
S [auth ID]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
T [auth IE]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
U [auth IF]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
V [auth JA]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
X [auth JC]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
Y [auth JD]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)
Z [auth JE]SCOP2B SuperfamilyCcmK-like8081332 3001326 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00936e6n0gA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
BPF00936e6n0gB2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
CPF00936e6n0gC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
W [auth JB]PF00936e6n0gJB1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
AA [auth JF]PF00936e6n0gJF1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
BA [auth KA]PF00936e6n0gKA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
CA [auth KB]PF00936e6n0gKB1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
D [auth GA]PF00936e6n0gGA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
DA [auth KC]PF00936e6n0gKC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
E [auth GB]PF00936e6n0gGB1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
EA [auth KD]PF00936e6n0gKD1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
F [auth GC]PF00936e6n0gGC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
FA [auth KE]PF00936e6n0gKE1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
G [auth GD]PF00936e6n0gGD1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
GA [auth KF]PF00936e6n0gKF1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
H [auth GE]PF00936e6n0gGE1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
HA [auth LA]PF00936e6n0gLA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
I [auth GF]PF00936e6n0gGF1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
IA [auth LB]PF00936e6n0gLB1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
J [auth HA]PF00936e6n0gHA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
JA [auth LC]PF00936e6n0gLC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
K [auth HB]PF00936e6n0gHB1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
KA [auth LD]PF00936e6n0gLD1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
L [auth HC]PF00936e6n0gHC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
LA [auth LE]PF00936e6n0gLE1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
M [auth HD]PF00936e6n0gHD1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
MA [auth LF]PF00936e6n0gLF1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
N [auth HE]PF00936e6n0gHE1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
O [auth HF]PF00936e6n0gHF1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
P [auth IA]PF00936e6n0gIA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
Q [auth IB]PF00936e6n0gIB1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
R [auth IC]PF00936e6n0gIC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
S [auth ID]PF00936e6n0gID1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
T [auth IE]PF00936e6n0gIE1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
U [auth IF]PF00936e6n0gIF1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
V [auth JA]PF00936e6n0gJA1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
X [auth JC]PF00936e6n0gJC1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
Y [auth JD]PF00936e6n0gJD1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
Z [auth JE]PF00936e6n0gJE1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
RA [auth K]F_UNCLASSIFIEDe6n0gK1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
RA [auth K]PF00936e6n0gK2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
SA [auth L]F_UNCLASSIFIEDe6n0gL2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
SA [auth L]PF00936e6n0gL1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
AB [auth T]F_UNCLASSIFIEDe6n0gT1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
AB [auth T]PF00936e6n0gT2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
BB [auth U]F_UNCLASSIFIEDe6n0gU2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
BB [auth U]PF00936e6n0gU1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
CB [auth V]F_UNCLASSIFIEDe6n0gV1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
CB [auth V]PF00936e6n0gV2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
DB [auth W]F_UNCLASSIFIEDe6n0gW2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
DB [auth W]PF00936e6n0gW1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
EB [auth X]F_UNCLASSIFIEDe6n0gX1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
EB [auth X]PF00936e6n0gX2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
NA [auth G]F_UNCLASSIFIEDe6n0gG2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
NA [auth G]PF00936e6n0gG1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
OA [auth H]F_UNCLASSIFIEDe6n0gH1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
OA [auth H]PF00936e6n0gH2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
PA [auth I]F_UNCLASSIFIEDe6n0gI1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
PA [auth I]PF00936e6n0gI2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
QA [auth J]F_UNCLASSIFIEDe6n0gJ2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
QA [auth J]PF00936e6n0gJ1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
TA [auth M]F_UNCLASSIFIEDe6n0gM2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
TA [auth M]PF00936e6n0gM1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
UA [auth N]F_UNCLASSIFIEDe6n0gN1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
UA [auth N]PF00936e6n0gN2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
VA [auth O]F_UNCLASSIFIEDe6n0gO1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
VA [auth O]PF00936e6n0gO2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
WA [auth P]F_UNCLASSIFIEDe6n0gP2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
WA [auth P]PF00936e6n0gP1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
XA [auth Q]F_UNCLASSIFIEDe6n0gQ2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
XA [auth Q]PF00936e6n0gQ1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
YA [auth R]F_UNCLASSIFIEDe6n0gR1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
YA [auth R]PF00936e6n0gR2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)
ZA [auth S]F_UNCLASSIFIEDe6n0gS1 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: F_UNCLASSIFIEDECOD (1.6)
ZA [auth S]PF00936e6n0gS2 A: a+b two layersX: Alpha-beta plaitsH: CcmK-like (From Topology)T: CcmK-likeF: PF00936ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Microcompartments protein- -
Microcompartments protein- -
Microcompartments protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR011238Bacterial microcompartment shell protein PduTFamily
A, B, C
IPR000249Bacterial microcompartment domainDomain
A, B, C
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
A, B, C
IPR037233CcmK-like superfamilyHomologous Superfamily
IPR020808Bacterial microcompartments protein, conserved siteConserved Site
IPR000249Bacterial microcompartment domainDomain
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily
IPR000249Bacterial microcompartment domainDomain
IPR044870Bacterial microcompartment (BMC) circularly permuted domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily