6MYB | pdb_00006myb

Room-temperature structure of deuterated Tetdron (isomorph 1)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d6mybh_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
G	d6mybg_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
F	d6mybf_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
E	d6mybe_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
D	d6mybd_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
C	d6mybc_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
B	d6mybb_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)
A	d6myba_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	(Echinophyllia sp. SC22 ) [TaxId: 301887 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GFP-like	8081039	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	YEATS	e6mybH1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
G	YEATS	e6mybG1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
F	YEATS	e6mybF1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
E	YEATS	e6mybE1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
D	YEATS	e6mybD1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
C	YEATS	e6mybC1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
B	YEATS	e6mybB1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)
A	YEATS	e6mybA1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: YEATS	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Photoswitchable protein Tetdron	identical protein binding protein binding binding	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000786	Green fluorescent protein, GFP	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011584	Green fluorescent protein-related	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR009017	Green fluorescent protein	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D, E A, B, C, D, E, F, G, H	GYC	Parent Component: CYS, TYR, GLY : AA0188 : L-cysteine 5-imidazolinone glycine MOD:00196