The structure of the Plasmodium falciparum 20S proteasome in complex with two PA28 activators
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| S [auth W] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064072 | 3000131 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064072 | 3000131 | SCOP2B (2022-06-29) |
| PA [auth U] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064068 | 3000131 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064068 | 3000131 | SCOP2B (2022-06-29) |
| MA [auth T] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064064 | 3000131 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064064 | 3000131 | SCOP2B (2022-06-29) |
| Q [auth S] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064024 | 3000131 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064024 | 3000131 | SCOP2B (2022-06-29) |
| P [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064032 | 3000131 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064032 | 3000131 | SCOP2B (2022-06-29) |
| LA [auth Q] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064028 | 3000131 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064028 | 3000131 | SCOP2B (2022-06-29) |
| O [auth P] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064034 | 3000131 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064034 | 3000131 | SCOP2B (2022-06-29) |
| OA [auth Z] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079498 | 3000131 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079498 | 3000131 | SCOP2B (2022-06-29) |
| NA [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064070 | 3000131 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064070 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| S [auth W] | Copper-bind | e6muvW1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Copper-bind | ECOD (v295.2) |
| I | Copper-bind | e6muvI1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Copper-bind | ECOD (v295.2) |
| R [auth V] | UQ_con | e6muvV1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| H | UQ_con | e6muvH1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| PA [auth U] | UQ_con | e6muvU1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| G | UQ_con | e6muvG1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| MA [auth T] | UQ_con | e6muvT1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| F | UQ_con | e6muvF1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| Q [auth S] | UQ_con | e6muvS1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| E | UQ_con | e6muvE1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| P [auth R] | UQ_con | e6muvR1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| D | UQ_con | e6muvD1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| LA [auth Q] | UQ_con | e6muvQ1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| C | UQ_con | e6muvC1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| O [auth P] | UQ_con | e6muvP1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| B | UQ_con | e6muvB1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| Z [auth g] | UQ_con | e6muvg1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| Y [auth f] | UQ_con | e6muvf1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| X [auth e] | UQ_con | e6muve1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| W [auth d] | UQ_con | e6muvd1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| V [auth c] | UQ_con | e6muvc1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| IA [auth p] | UQ_con | e6muvp1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| HA [auth o] | UQ_con | e6muvo1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| GA [auth n] | UQ_con | e6muvn1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| FA [auth m] | UQ_con | e6muvm1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| EA [auth l] | UQ_con | e6muvl1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| DA [auth k] | UQ_con | e6muvk1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| CA [auth j] | UQ_con | e6muvj1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| BA [auth i] | UQ_con | e6muvi1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| AA [auth h] | UQ_con | e6muvh1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| N | UQ_con | e6muvN1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| JA [auth b] | UQ_con | e6muvb1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| U [auth a] | UQ_con | e6muva1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| M | UQ_con | e6muvM1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| OA [auth Z] | UQ_con | e6muvZ1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| L | UQ_con | e6muvL1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| T [auth Y] | UQ_con | e6muvY1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| K | UQ_con | e6muvK1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| KA [auth X] | UQ_con | e6muvX1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| J | UQ_con | e6muvJ1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| NA [auth O] | UQ_con | e6muvO1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
| A | UQ_con | e6muvA1 | A: alpha arrays | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: UQ_con | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I, S [auth W] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| H, R [auth V] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| G, PA [auth U] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| G, PA [auth U] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| F, MA [auth T] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| F, MA [auth T] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| E, Q [auth S] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| E, Q [auth S] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| D, P [auth R] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| C, LA [auth Q] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| B, O [auth P] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| JA [auth b], N | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| M, U [auth a] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| L, OA [auth Z] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| K, T [auth Y] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| J, KA [auth X] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A, NA [auth O] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A, NA [auth O] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |














