Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth K] | SCOP2B Superfamily | CRISPR-associated proteins | 8085899 | 3001554 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | CRISPR-associated proteins | 8085899 | 3001554 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | CRISPR-associated proteins | 8085899 | 3001554 | SCOP2B (2022-06-29) |
| H [auth J] | SCOP2B Superfamily | Type III-A Csm2-like | 8089564 | 3002163 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Type III-A Csm2-like | 8089563 | 4004151 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Type III-A Csm2-like | 8089564 | 3002163 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J [auth F] | AAA | e6musF1 | A: alpha arrays | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: AAA | ECOD (v295.2) |
| E | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musE1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| I [auth K] | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musK1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| D | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musD1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| C | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musC1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| H [auth J] | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musJ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| B | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musB1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| A | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6musA1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| J [auth F] | Uncharacterized protein Csm5 | - | - | - |
| G [auth H] | RNA (25-MER) | - | - | - |
| F [auth G] | RNA (33-MER) | - | - | - |
| Uncharacterized protein Csm4 | - | - | - | |
| C, D, I [auth K] | Uncharacterized protein Csm3 | - | - | - |
| B, H [auth J] | Uncharacterized protein Csm2 | - | - | - |
| Uncharacterized protein Csm1 | - | - |