6MON
Crystal structure of human SMYD2 in complex with Nle-peptide inhibitor
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01753 | e6monA2 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: PF01753 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6monA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF01753 | e6monB1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: PF01753 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6monB2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (utative) |
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (utative) |
B | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (utative) |
B | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF01753 | MYND finger (zf-MYND) | MYND finger | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046341 | SET domain superfamily | Homologous Superfamily | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR001214 | SET domain | Domain | |
IPR050869 | Histone-lysine N-methyltransferase | Family | |
IPR002893 | Zinc finger, MYND-type | Domain | |
IPR044419 | SMYD2, SET domain | Domain |