6MGG
Succinyl-CoA synthase from Francisella tularensis, phosphorylated, in complex with CoA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | CoA_binding | e6mggC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: CoA_binding | ECOD (1.6) |
C | Succ_CoA_lig | e6mggC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Succinyl-CoA synthetase domains (From Topology) | T: Succinyl-CoA synthetase domains | F: Succ_CoA_lig | ECOD (1.6) |
A | CoA_binding | e6mggA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: CoA_binding | ECOD (1.6) |
A | Succ_CoA_lig | e6mggA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Succinyl-CoA synthetase domains (From Topology) | T: Succinyl-CoA synthetase domains | F: Succ_CoA_lig | ECOD (1.6) |
D | ATP-grasp_2 | e6mggD2 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: ATP-grasp_2 | ECOD (1.6) |
D | Citrate_bind | e6mggD1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Succinyl-CoA synthetase domains (From Topology) | T: Succinyl-CoA synthetase domains | F: Citrate_bind | ECOD (1.6) |
B | ATP-grasp_2 | e6mggB2 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: ATP-grasp_2 | ECOD (1.6) |
B | Citrate_bind | e6mggB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Succinyl-CoA synthetase domains (From Topology) | T: Succinyl-CoA synthetase domains | F: Citrate_bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02629 | CoA binding domain (CoA_binding) | CoA binding domain | This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases. | Domain | |
PF00549 | CoA-ligase (Ligase_CoA) | CoA-ligase | This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains, malate CoA ligase and ATP-citrate lyase. Some members of the family utilise ATP others use GTP. | Domain | |
PF08442 | ATP-grasp domain (ATP-grasp_2) | ATP-grasp domain | - | Domain | |
PF00549 | CoA-ligase (Ligase_CoA) | CoA-ligase | This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains, malate CoA ligase and ATP-citrate lyase. Some members of the family utilise ATP others use GTP. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016102 | Succinyl-CoA synthetase-like | Homologous Superfamily | |
IPR017440 | ATP-citrate lyase/succinyl-CoA ligase, active site | Active Site | |
IPR033847 | ATP-citrate lyase/succinyl-CoA ligase, conserved site | Conserved Site | |
IPR003781 | CoA-binding | Domain | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR005810 | Succinyl-CoA ligase, alpha subunit | Family | |
IPR005811 | ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain | Domain | |
IPR011761 | ATP-grasp fold | Domain | |
IPR013815 | ATP-grasp fold, subdomain 1 | Homologous Superfamily | |
IPR016102 | Succinyl-CoA synthetase-like | Homologous Superfamily | |
IPR013650 | ATP-grasp fold, succinyl-CoA synthetase-type | Domain | |
IPR017866 | Succinyl-CoA synthetase, beta subunit, conserved site | Conserved Site | |
IPR005811 | ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain | Domain | |
IPR005809 | Succinate--CoA ligase-like, beta subunit | Family |