6LZ4
Crystal structure of PMab-1 Fv-clasp fragment with its antigen peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF07686,PF11629 | e6lz4B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686,PF11629 | ECOD (1.6) |
E | PF07686,PF11629 | e6lz4E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686,PF11629 | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
PMAB-1 VH(S112C)-SARAH CHIMERA,B, E | VH | Rattus norvegicus (Norway rat) | IGHV1-24*01, IGHJ3*01 | V-DOMAIN VH | IG | FV-HEAVY_KAPPA | IMGT (202431-0) | |
PMAB-1 VH(S112C)-SARAH CHIMERA,B, E | V-KAPPA | Rattus norvegicus (Norway rat) | IGKV3S1*01, IGKJ2-1*01 | V-DOMAIN V-KAPPA | IG | FV-HEAVY_KAPPA | IMGT (202431-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV1 | - | map peptide | SAbDab (2024-08-09) | |
Light Chain | IGKV3 | Kappa | map peptide | SAbDab (2024-08-09) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR052684 | Podoplanin domain-containing protein | Family |