6LON
Crystal structure of HPSG
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6lonb_ | Alpha and beta proteins (a/b) | PFL-like glycyl radical enzymes | PFL-like glycyl radical enzymes | automated matches | automated matches | (Bilophila wadsworthia 3_1_6 ) [TaxId: 563192 ], | SCOPe (2.08) |
B [auth A] | d6lona_ | Alpha and beta proteins (a/b) | PFL-like glycyl radical enzymes | PFL-like glycyl radical enzymes | automated matches | automated matches | (Bilophila wadsworthia 3_1_6 ) [TaxId: 563192 ], | SCOPe (2.08) |
C | d6lonc_ | Alpha and beta proteins (a/b) | PFL-like glycyl radical enzymes | PFL-like glycyl radical enzymes | automated matches | automated matches | (Bilophila wadsworthia 3_1_6 ) [TaxId: 563192 ], | SCOPe (2.08) |
D | d6lond_ | Alpha and beta proteins (a/b) | PFL-like glycyl radical enzymes | PFL-like glycyl radical enzymes | automated matches | automated matches | (Bilophila wadsworthia 3_1_6 ) [TaxId: 563192 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | PFL-like glycyl radical enzymes | 8097680 | 3001069 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | PFL-like glycyl radical enzymes | 8097680 | 3001069 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PFL-like glycyl radical enzymes | 8097680 | 3001069 | SCOP2B (2022-06-29) |
D | SCOP2 Family | PFL-like | 8097679 | 4003576 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | PFL-like glycyl radical enzymes | 8097680 | 3001069 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PFL-like | e6lonB2 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: PFL-like | ECOD (1.6) |
A [auth B] | PFL-like | e6lonB1 | A: extended segments | X: Glycyl radical domain (From Topology) | H: Glycyl radical domain (From Topology) | T: Glycyl radical domain | F: PFL-like | ECOD (1.6) |
B [auth A] | PFL-like | e6lonA1 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: PFL-like | ECOD (1.6) |
B [auth A] | PFL-like | e6lonA2 | A: extended segments | X: Glycyl radical domain (From Topology) | H: Glycyl radical domain (From Topology) | T: Glycyl radical domain | F: PFL-like | ECOD (1.6) |
C | PFL-like | e6lonC2 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: PFL-like | ECOD (1.6) |
C | PFL-like | e6lonC1 | A: extended segments | X: Glycyl radical domain (From Topology) | H: Glycyl radical domain (From Topology) | T: Glycyl radical domain | F: PFL-like | ECOD (1.6) |
D | PFL-like | e6lonD1 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: PFL-like | ECOD (1.6) |
D | PFL-like | e6lonD2 | A: extended segments | X: Glycyl radical domain (From Topology) | H: Glycyl radical domain (From Topology) | T: Glycyl radical domain | F: PFL-like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (utative) | |
B [auth A] | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (utative) | |
C | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (utative) | |
D | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C, D | PF01228 | Glycine radical (Gly_radical) | Glycine radical | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth A], C, D | PFL2/glycerol dehydratase family glycyl radical enzyme |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A], C, D | IPR051215 | Glycyl Radical Enzyme | Family |
A [auth B], B [auth A], C, D | IPR004184 | Pyruvate formate lyase domain | Domain |
A [auth B], B [auth A], C, D | IPR001150 | Glycine radical domain | Domain |
A [auth B], B [auth A], C, D | IPR019777 | Formate C-acetyltransferase glycine radical, conserved site | Conserved Site |