6LMJ
ASFV pA104R in complex with double-strand DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Prokaryotic DNA-bending protein | 8098907 | 4001007 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | IHF-like DNA-binding proteins | 8098908 | 3000426 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | IHF-like DNA-binding proteins | 8098908 | 3000426 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Bac_DNA_binding | e6lmjA1 | A: alpha arrays | X: HTH | H: IHF-like DNA-binding proteins (From Topology) | T: IHF-like DNA-binding proteins | F: Bac_DNA_binding | ECOD (1.6) |
B | Bac_DNA_binding | e6lmjB1 | A: alpha arrays | X: HTH | H: IHF-like DNA-binding proteins (From Topology) | T: IHF-like DNA-binding proteins | F: Bac_DNA_binding | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 4.10.520.10 | Few Secondary Structures | Irregular | HU Protein | Chain A | CATH (utative) |
B | 4.10.520.10 | Few Secondary Structures | Irregular | HU Protein | Chain A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00216 | Bacterial DNA-binding protein (Bac_DNA_binding) | Bacterial DNA-binding protein | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A104R | ||||
DNA (5'-D(*TP*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*A)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020816 | Histone-like DNA-binding protein, conserved site | Conserved Site | |
IPR010992 | Integration host factor (IHF)-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR000119 | Histone-like DNA-binding protein | Family |