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 6LMJ | pdb_00006lmj

ASFV pA104R in complex with double-strand DNA

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyIHF-like DNA-binding proteins 8098908 3000426 SCOP2B (2022-06-29)
ASCOP2 FamilyProkaryotic DNA-bending protein 8098907 4001007 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyIHF-like DNA-binding proteins 8098908 3000426 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BC1-sete6lmjB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: C1-setECOD (v295.2)
AC1-sete6lmjA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: C1-setECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B4.10.520.10 Few Secondary Structures Irregular HU Protein Chain ACATH (utative)
A4.10.520.10 Few Secondary Structures Irregular HU Protein Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00216Bacterial DNA-binding protein (Bac_DNA_binding)Bacterial DNA-binding proteinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
DNA (5'-D(*TP*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*A)-3')---
A, B
A104R -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR020816Histone-like DNA-binding protein, conserved siteConserved Site
A, B
IPR010992Integration host factor (IHF)-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR000119Histone-like DNA-binding proteinFamily