Annotations: 6LK8

Structure of Xenopus laevis Cytoplasmic Ring subunit.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X [auth b]	SCOP2B Superfamily	Coat and nuclear envelope proteins	8105019	3002276	SCOP2B (2022-06-29)
B	SCOP2 Family	Nucleoporin NUP85	8105018	4006614	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Coat and nuclear envelope proteins	8105019	3002276	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Myb_DNA-binding	e6lk8D1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Myb_DNA-binding	ECOD (v295.2)
Z [auth d]	Utp12	e6lk8d1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
I	Ion_trans	e6lk8I01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: Ion_trans	ECOD (v295.2)
EA [auth i]	AAA	e6lk8i1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
H	Myb_DNA-binding	e6lk8H1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Myb_DNA-binding	ECOD (v295.2)
DA [auth h]	Utp12	e6lk8h1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
G	Ion_trans	e6lk8G01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: Ion_trans	ECOD (v295.2)
CA [auth g]	AAA	e6lk8g1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA	ECOD (v295.2)
F	Myb_DNA-binding	e6lk8F1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Myb_DNA-binding	ECOD (v295.2)
BA [auth f]	Utp12	e6lk8f1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
E	Myb_DNA-binding	e6lk8E1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Myb_DNA-binding	ECOD (v295.2)
AA [auth e]		e6lk8e1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)
Y [auth c]	Myb_DNA-binding	e6lk8c1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Myb_DNA-binding	ECOD (v295.2)
C	Utp12	e6lk8C1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
X [auth b]		e6lk8b1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)
B		e6lk8B1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)
N [auth V]	Utp12	e6lk8V1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
M [auth U]	Myb_DNA-binding	e6lk8U1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Myb_DNA-binding	ECOD (v295.2)
L [auth T]	Utp12	e6lk8T1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
K [auth S]	Utp12	e6lk8S1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
J	Utp12	e6lk8J1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Utp12	ECOD (v295.2)
FA [auth j]		e6lk8j1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D, Z [auth d]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
EA [auth i], I	PF04121	Nuclear pore protein 84 / 107 (Nup84_Nup100)	Nuclear pore protein 84 / 107	-	Repeat
DA [auth h], H	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
CA [auth g], G	PF12110	Nuclear protein 96 (Nup96)	Nuclear protein 96	Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the n ...	Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the nuclear pore complex between the inner and outer nuclear membranes. Nup96 is predicted to be an alpha helical solenoid. The interaction between Nup96 and Sec13 is the point of curvature in the heptameric complex. [1] [2]	Domain
BA [auth f], F	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
AA [auth e], E	PF23347	Nup160 C-terminal TPR (TPR_Nup160_C)	Nup160 C-terminal TPR	-	Repeat
AA [auth e], E	PF23345	Nucleoporin NUP160, helical domain (NUP160_helical)	Nucleoporin NUP160, helical domain	This entry represents the central helical domain of NUP160, which is found in animals, including humans, mice, and Drosophila melanogaster. NUP160 is one of up to 60 proteins that constitute the Nuclear Pore Complex (NPC) as a component of the NUP107 ...	This entry represents the central helical domain of NUP160, which is found in animals, including humans, mice, and Drosophila melanogaster. NUP160 is one of up to 60 proteins that constitute the Nuclear Pore Complex (NPC) as a component of the NUP107-160 subcomplex [1]. NUP160, in conjunction with NUP133, interacts with NUP98 and NUP153, mediating mRNA export [1]. NUP160 mutations have been associated with Steroid-Resistant Nephrotic Syndrome (SRNS). Silencing Drosophila NUP160 specifically in nephrocytes results in functional abnormalities, reduced cell size and nuclear volume, as well as a disorganised nuclear membrane structure [2].	Domain
AA [auth e], E	PF23354	NUP160/120 middle TPR (TPR_NUP160_120_M)	NUP160/120 middle TPR	-	Repeat
AA [auth e], E	PF11715	Nucleoporin Nup120/160, beta-propeller domain (Beta-prop_Nup120_160)	Nucleoporin Nup120/160, beta-propeller domain	-	Repeat
C, Y [auth c]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
B, X [auth b]	PF07575	Nup85 Nucleoporin (Nucleopor_Nup85)	Nup85 Nucleoporin	-	Repeat
FA [auth j], J	PF03177	Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C)	Non-repetitive/WGA-negative nucleoporin C-terminal	-	Repeat
FA [auth j], J	PF08801	Nup133 N terminal like (Nucleoporin_N)	Nup133 N terminal like	-	Repeat
A, W [auth a]	PF11894	Nuclear pore complex scaffold, nucleoporins 186/192/205 (Nup192)	Nuclear pore complex scaffold, nucleoporins 186/192/205	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D, Z [auth d]	Nucleoporin SEH1-A	structural molecule activity	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling positive regulation of signaling RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport mitotic metaphase chromosome alignment mitotic cell cycle metaphase chromosome alignment chromosome localization organelle localization mitotic sister chromatid segregation cell cycle chromosome segregation cell cycle process mitotic nuclear division attachment of spindle microtubules to kinetochore organelle fission attachment of mitotic spindle microtubules to kinetochore chromosome organization sister chromatid segregation nuclear division mitotic cell cycle process nuclear chromosome segregation cell division cellular response to nutrient levels response to nutrient levels establishment of protein localization protein transport intracellular protein localization cellular response to amino acid starvation cellular response to starvation cellular response to stress response to stress response to amino acid starvation response to starvation	protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane cytoplasm organelle membrane lysosome intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome cytosol GATOR2 complex
EA [auth i], I	Nuclear pore complex protein	structural molecule activity structural constituent of nuclear pore	cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
DA [auth h], H	GATOR complex protein SEC13	structural molecule activity	membrane organization vesicle budding from membrane cellular localization transport intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization vesicle organization localization organelle organization establishment of localization in cell cellular process membrane organization vesicle budding from membrane cellular localization transport intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization vesicle organization localization organelle organization establishment of localization in cell cellular process cellular component organization or biogenesis COPII-coated vesicle budding Golgi vesicle transport cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling establishment of protein localization nucleocytoplasmic transport nuclear transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane cytoplasm organelle membrane lysosome cytosol vesicle coat intracellular vesicle transport vesicle membrane membrane protein complex membrane coat vesicle membrane cytoplasmic vesicle ER to Golgi transport vesicle membrane coated vesicle vesicle transport vesicle coated membrane COPII vesicle coat cytoplasmic vesicle membrane coated vesicle membrane COPII-coated ER to Golgi transport vesicle
CA [auth g], G	Nuclear pore complex protein Nup96	RNA binding binding nucleic acid binding structural molecule activity structural constituent of nuclear pore	localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane membrane-enclosed lumen membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex nuclear protein-containing complex nuclear pore cytoplasmic filaments nuclear pore
BA [auth f], F	MGC83926 protein	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
AA [auth e], E	outer Nup160	structural molecule activity structural constituent of nuclear pore	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
C, Y [auth c]	MGC154553 protein	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
B, X [auth b]	Nuclear pore complex protein Nup85	structural molecule activity structural constituent of nuclear pore	developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development establishment of protein localization cellular localization nucleocytoplasmic transport transport developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus cellular process intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
U [auth Q], V [auth R]	bridge domain	-	-	-
T [auth P]	Nup214 complex Coiled coil region 2, helix 3	-	-	-
S [auth O]	Nup214 complex Coiled coil region 2, helix 2	-	-	-
R [auth N]	Nup214 complex Coiled coil region 2, helix 1	-	-	-
Q [auth M]	Nup214 complex coiled coil region 1, helix 3	-	-	-
P [auth L]	Nup214 complex coiled coil region 1, helix 2	-	-	-
O [auth K]	Nup214 complex Coiled-coil region 1, helix 1	-	-	-
K [auth S], L [auth T], M [auth U], N [auth V]	Nup358 complex, clamps	GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm nuclear membrane membrane organelle membrane
FA [auth j], J	outer Nup133	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process developmental process animal organ development anatomical structure development animal gross anatomical part developmental process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport cellular component organization organelle organization chromosome organization cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery multicellular organism development multicellular organismal process system development	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
A, W [auth a]	MGC83295 protein	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis	nuclear pore inner ring membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D, Z [auth d]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
D, Z [auth d]	IPR037363	Sec13/Seh1 family	Family
D, Z [auth d]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
D, Z [auth d]	IPR001680	WD40 repeat	Repeat
D, Z [auth d]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
EA [auth i], I	IPR007252	Nuclear pore protein 84/107	Family
DA [auth h], H	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
DA [auth h], H	IPR037363	Sec13/Seh1 family	Family
DA [auth h], H	IPR001680	WD40 repeat	Repeat
DA [auth h], H	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
CA [auth g], G	IPR025574	Nucleoporin FG repeat	Repeat
CA [auth g], G	IPR037665	Nucleoporin peptidase S59-like	Family
CA [auth g], G	IPR036903	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Homologous Superfamily
CA [auth g], G	IPR007230	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Domain
CA [auth g], G	IPR021967	Nuclear pore complex protein NUP96, C-terminal domain	Domain
BA [auth f], F	IPR037626	Nucleoporin Nup37	Family
BA [auth f], F	IPR001680	WD40 repeat	Repeat
BA [auth f], F	IPR019775	WD40 repeat, conserved site	Conserved Site
BA [auth f], F	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
BA [auth f], F	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AA [auth e], E	IPR056535	NUP160, middle TPR domain	Domain
AA [auth e], E	IPR059141	Nucleoporin Nup120/160, beta-propeller domain	Domain
AA [auth e], E	IPR021717	Nucleoporin Nup120/160	Family
AA [auth e], E	IPR056536	NUP160, C-terminal TPR domain	Domain
AA [auth e], E	IPR056547	NUP160, helical domain	Domain
C, Y [auth c]	IPR001680	WD40 repeat	Repeat
C, Y [auth c]	IPR019775	WD40 repeat, conserved site	Conserved Site
C, Y [auth c]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C, Y [auth c]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B, X [auth b]	IPR011502	Nucleoporin Nup85-like	Family
K [auth S], L [auth T], M [auth U], N [auth V]	IPR036443	Zinc finger, RanBP2-type superfamily	Homologous Superfamily
K [auth S], L [auth T], M [auth U], N [auth V]	IPR022011	Nup358/RanBP2 E3 ligase domain	Domain
K [auth S], L [auth T], M [auth U], N [auth V]	IPR011993	PH-like domain superfamily	Homologous Superfamily
K [auth S], L [auth T], M [auth U], N [auth V]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
K [auth S], L [auth T], M [auth U], N [auth V]	IPR000156	Ran binding domain	Domain
K [auth S], L [auth T], M [auth U], N [auth V]	IPR019734	Tetratricopeptide repeat	Repeat
K [auth S], L [auth T], M [auth U], N [auth V]	IPR001876	Zinc finger, RanBP2-type	Domain
K [auth S], L [auth T], M [auth U], N [auth V]	IPR045255	Ran binding protein RanBP1-like	Family
FA [auth j], J	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
FA [auth j], J	IPR037624	Nuclear pore complex protein Nup133-like	Family
FA [auth j], J	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
FA [auth j], J	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
A, W [auth a]	IPR021827	Nucleoporin Nup186/Nup192/Nup205	Family