Cryo-EM structure of human MLL1-NCP complex, binding mode1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M [auth R] | V-set | e6kixR1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| L [auth K] | Copper-bind | e6kixK1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Copper-bind | ECOD (v295.2) |
| K [auth N] | AAA | e6kixN1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA | ECOD (v295.2) |
| H | V-set | e6kixH1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| D | V-set | e6kixD1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| G | V-set | e6kixG1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| C | V-set | e6kixC1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| F | V-set | e6kixF1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| B | V-set | e6kixB1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| N [auth T] | V-set | e6kixT1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| E | V-set | e6kixE1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
| A | V-set | e6kixA1 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: V-set | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| M [auth R] | PF25175 | WDR5 beta-propeller domain (Beta-prop_WDR5) | WDR5 beta-propeller domain | - | Repeat |
| L [auth K] | PF00856 | SET domain (SET) | SET domain | - | Family |
| K [auth N] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family | |
| PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
| N [auth T] | PF00622 | SPRY domain (SPRY) | SPRY domain | SPRY Domain is named from SPla and the RYanodine Receptor and it is found in many eukaryotic proteins with a wide range of functions. It is a protein-interaction module involved in many important signalling pathways like RNA processing, regulation of ... | Domain |
| PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain |














