C2S2M2N2-type PSII-LHCII
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| VA [auth R] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100370 | 3000343 | SCOP2B (2022-06-29) |
| A [auth r] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100370 | 3000343 | SCOP2B (2022-06-29) |
| Q [auth A] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8094419 | 3000736 | SCOP2B (2022-06-29) |
| B [auth a] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8094419 | 3000736 | SCOP2B (2022-06-29) |
| C [auth d] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8094383 | 3000736 | SCOP2B (2022-06-29) |
| AB [auth D] | SCOP2B Superfamily | Bacterial photosystem II reaction centre, L and M subunits | 8094383 | 3000736 | SCOP2B (2022-06-29) |
| S [auth F] | SCOP2B Superfamily | Cytochrome b559 subunits | 8093904 | 3001602 | SCOP2B (2022-06-29) |
| D [auth f] | SCOP2B Superfamily | Cytochrome b559 subunits | 8093904 | 3001602 | SCOP2B (2022-06-29) |
| T [auth H] | SCOP2B Superfamily | Photosystem II 10 kDa phosphoprotein PsbH | 8094651 | 3001547 | SCOP2B (2022-06-29) |
| E [auth h] | SCOP2B Superfamily | Photosystem II 10 kDa phosphoprotein PsbH | 8094651 | 3001547 | SCOP2B (2022-06-29) |
| U [auth I] | SCOP2B Superfamily | Photosystem II reaction center protein I, PsbI | 8094000 | 3001590 | SCOP2B (2022-06-29) |
| F [auth i] | SCOP2B Superfamily | Photosystem II reaction center protein I, PsbI | 8094000 | 3001590 | SCOP2B (2022-06-29) |
| W [auth K] | SCOP2B Superfamily | Photosystem II reaction center protein K, PsbK | 8093946 | 3001585 | SCOP2B (2022-06-29) |
| H [auth k] | SCOP2B Superfamily | Photosystem II reaction center protein K, PsbK | 8093946 | 3001585 | SCOP2B (2022-06-29) |
| X [auth L] | SCOP2 Family | PsbL-like | 8094508 | 4002634 | SCOP2 (2022-06-29) |
| X [auth L] | SCOP2 Superfamily | Photosystem II reaction center protein L, PsbL | 8094509 | 3001523 | SCOP2 (2022-06-29) |
| I [auth l] | SCOP2B Superfamily | Photosystem II reaction center protein L, PsbL | 8094509 | 3001523 | SCOP2B (2022-06-29) |
| Y [auth M] | SCOP2B Superfamily | Photosystem II reaction center protein M, PsbM | 8094094 | 3001573 | SCOP2B (2022-06-29) |
| J [auth m] | SCOP2 Family | PsbM-like | 8094093 | 4002664 | SCOP2 (2022-06-29) |
| J [auth m] | SCOP2 Superfamily | Photosystem II reaction center protein M, PsbM | 8094094 | 3001573 | SCOP2 (2022-06-29) |
| ZA [auth O] | SCOP2B Superfamily | OMPA barrel-like | 8095507 | 3000208 | SCOP2B (2022-06-29) |
| K [auth o] | SCOP2 Family | PsbO-like | 8095506 | 4002770 | SCOP2 (2022-06-29) |
| K [auth o] | SCOP2 Superfamily | OMPA barrel-like | 8095507 | 3000208 | SCOP2 (2022-06-29) |
| O [auth z] | SCOP2 Family | PsbZ-like | 8094159 | 4002701 | SCOP2 (2022-06-29) |
| O [auth z] | SCOP2 Superfamily | PsbZ-like | 8094160 | 3001624 | SCOP2 (2022-06-29) |
| BA [auth Z] | SCOP2B Superfamily | PsbZ-like | 8094160 | 3001624 | SCOP2B (2022-06-29) |
| R [auth E] | SCOP2B Superfamily | Cytochrome b559 subunits | 8094631 | 3001602 | SCOP2B (2022-06-29) |
| DB [auth e] | SCOP2B Superfamily | Cytochrome b559 subunits | 8094631 | 3001602 | SCOP2B (2022-06-29) |
| UA [auth g] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| TA [auth n] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| SA [auth u] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| RA [auth G] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| QA [auth N] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| PA [auth U] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| OA [auth Q] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| NA [auth P] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| MA [auth V] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| LA [auth q] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| KA [auth p] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| JA [auth v] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| IA [auth 6] | SCOP2 Family | Chlorophyll a-b binding protein | 8094578 | 4001763 | SCOP2 (2022-06-29) |
| IA [auth 6] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2 (2022-06-29) |
| HA [auth 5] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| GA [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| FA [auth 3] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| EA [auth 2] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| DA [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8094579 | 3000343 | SCOP2B (2022-06-29) |
| WA [auth S] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100486 | 3000343 | SCOP2B (2022-06-29) |
| FB [auth s] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100486 | 3000343 | SCOP2B (2022-06-29) |
| YA [auth B] | SCOP2B Superfamily | Photosystem II antenna protein-like | 8094573 | 3001674 | SCOP2B (2022-06-29) |
| CB [auth b] | SCOP2 Family | Photosystem II antenna protein-like | 8094572 | 4002735 | SCOP2 (2022-06-29) |
| CB [auth b] | SCOP2 Superfamily | Photosystem II antenna protein-like | 8094573 | 3001674 | SCOP2 (2022-06-29) |
| XA [auth C] | SCOP2B Superfamily | Photosystem II antenna protein-like | 8094477 | 3001674 | SCOP2B (2022-06-29) |
| EB [auth c] | SCOP2 Family | Photosystem II antenna protein-like | 8094476 | 4002735 | SCOP2 (2022-06-29) |
| EB [auth c] | SCOP2 Superfamily | Photosystem II antenna protein-like | 8094477 | 3001674 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| VA [auth R] | PSII | e6kafR1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| A [auth r] | PSII | e6kafr1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| Q [auth A] | PSII | e6kafA1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| B [auth a] | PSII | e6kafa1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| C [auth d] | PSII | e6kafd1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| AB [auth D] | PSII | e6kafD1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| S [auth F] | PSII | e6kafF1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| D [auth f] | PSII | e6kaff1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| T [auth H] | PSII | e6kafH1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| E [auth h] | PSII | e6kafh1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| U [auth I] | PSII | e6kafI1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| F [auth i] | PSII | e6kafi1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| V [auth J] | PSII | e6kafJ1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| G [auth j] | PSII | e6kafj1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| W [auth K] | PSII | e6kafK1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| H [auth k] | PSII | e6kafk1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| X [auth L] | PSII | e6kafL1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| I [auth l] | PSII | e6kafl1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| Y [auth M] | PSII | e6kafM1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| J [auth m] | PSII | e6kafm1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| ZA [auth O] | PSII | e6kafO1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| K [auth o] | PSII | e6kafo1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| Z [auth T] | PSII | e6kafT1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| L [auth t] | PSII | e6kaft1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| M [auth w] | PSII | e6kafw1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| AA [auth W] | PSII | e6kafW1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| N [auth x] | PSII | e6kafx1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| BB [auth X] | PSII | e6kafX1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| O [auth z] | PSII | e6kafz1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| BA [auth Z] | PSII | e6kafZ1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| P [auth Y] | PSII | e6kafY1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| CA [auth y] | PSII | e6kafy1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| R [auth E] | PSII | e6kafE1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| DB [auth e] | PSII | e6kafe1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| UA [auth g] | PSII | e6kafg1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| TA [auth n] | PSII | e6kafn1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| SA [auth u] | PSII | e6kafu1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| RA [auth G] | PSII | e6kafG1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| QA [auth N] | PSII | e6kafN1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| PA [auth U] | PSII | e6kafU1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| OA [auth Q] | PSII | e6kafQ1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| NA [auth P] | PSII | e6kafP1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| MA [auth V] | PSII | e6kafV1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| LA [auth q] | PSII | e6kafq1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| KA [auth p] | PSII | e6kafp1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| JA [auth v] | PSII | e6kafv1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| IA [auth 6] | PSII | e6kaf61 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| HA [auth 5] | PSII | e6kaf51 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| GA [auth 4] | PSII | e6kaf41 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| FA [auth 3] | PSII | e6kaf31 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| EA [auth 2] | PSII | e6kaf21 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| DA [auth 1] | PSII | e6kaf11 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| WA [auth S] | PSII | e6kafS1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| FB [auth s] | PSII | e6kafs1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| YA [auth B] | PSII | e6kafB1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| CB [auth b] | PSII | e6kafb1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| XA [auth C] | PSII | e6kafC1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
| EB [auth c] | PSII | e6kafc1 | A: beta barrels | X: jelly-roll | H: DUF1107-like | T: DUF1107-like | F: PSII | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystem+Light-Harvesting Complex Supercomplex | C2S2M2N2-type PSII-LHCII supercomplex |














