6JW5
RVD Q* recognizes 5hmC through water-mediated H bonds
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TAL_effector | e6jw5A1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
D [auth B] | TAL_effector | e6jw5B1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
G [auth E] | TAL_effector | e6jw5E1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
J [auth H] | TAL_effector | e6jw5H1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B], G [auth E], J [auth H] | PF03377 | TAL effector repeat (TAL_effector) | TAL effector repeat | - | Repeat |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B], G [auth E], J [auth H] | IPR053450 | Transcription activator-like effector protein | Family |
A, D [auth B], G [auth E], J [auth H] | IPR005042 | TAL effector repeat | Repeat |