6JTJ
Crystal structure of NagZ from Neisseria gonorrhoeae in complex with N-acetylglucosamine
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | (Trans)glycosidases | 8099582 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2 Family | NagZ-like | 8099581 | 4003202 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | (Trans)glycosidases | 8099582 | 3000313 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | (Trans)glycosidases | 8099582 | 3000313 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | (Trans)glycosidases | 8099582 | 3000313 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | (Trans)glycosidases | 8099582 | 3000313 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | (Trans)glycosidases | 8099582 | 3000313 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_3 | e6jtjA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
B | Glyco_hydro_3 | e6jtjB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
C | Glyco_hydro_3 | e6jtjC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
D | Glyco_hydro_3 | e6jtjD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
E | Glyco_hydro_3 | e6jtjE1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
F | Glyco_hydro_3 | e6jtjF1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
B | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
C | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
D | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
E | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
F | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001764 | Glycoside hydrolase, family 3, N-terminal | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR022956 | Beta-hexosaminidase, bacterial | Family | |
IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily | Homologous Superfamily | |
IPR050226 | NagZ Beta-hexosaminidase | Family | |
IPR019800 | Glycoside hydrolase, family 3, active site | Active Site |