Annotations: 6JMR

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth E]	V-set_8	e6jmrE1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_8	ECOD (1.6)
A [auth E]	C1-set_1	e6jmrE2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)
B [auth F]	C1-set_4	e6jmrF1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_4	ECOD (1.6)
B [auth F]	V-set	e6jmrF2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (1.6)
C [auth B]	Malt_amylase_C_2	e6jmrB1	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: Malt_amylase_C_2	ECOD (1.6)
C [auth B]	Alpha-amylase	e6jmrB2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Alpha-amylase	ECOD (1.6)
D [auth C]	V-set_8	e6jmrC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_8	ECOD (1.6)
D [auth C]	C1-set_1	e6jmrC2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)
E [auth D]	C1-set_4	e6jmrD2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_4	ECOD (1.6)
E [auth D]	V-set	e6jmrD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (1.6)

IMGT Antibody Annotation IMGT Database Homepage

Chain	Protein Name	Description	Organism Name	Gene Allele Name(s)	Domain Name(s)	Receptor Type	Receptor Description	Provenance Source
A [auth E]	-	VH-CH1	-	IGHV2-402, IGHJ401, IGHG1*02	V-DOMAIN VH, C-DOMAIN CH1	IG	FAB-GAMMA-1_KAPPA	IMGT (202449-0)
B [auth F]	-	L-KAPPA	-	IGKV8-3001, IGKJ101, IGKJ201, IGKC01, IGKC*02	V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA	IG	FAB-GAMMA-1_KAPPA	IMGT (202449-0)
D [auth C]	-	VH	-	IGHV2-6-701, IGHV2-9-101, IGHV2-6-7*02	V-DOMAIN VH	IG	(VH)	IMGT (202449-0)
E [auth D]	ANTIBODY,F	V-KAPPA	-	IGKV8-30*01	V-DOMAIN V-KAPPA	IG	(V-KAPPA)	IMGT (202449-0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth B]	PF00128	Alpha amylase, catalytic domain (Alpha-amylase)	Alpha amylase, catalytic domain	Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, a ...	Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth E]	Antibody	-	-	-
B [auth F]	Antibody	-	-	-
C [auth B]	4F2 cell-surface antigen heavy chain	monoatomic cation transmembrane transporter activity metal cation:monoatomic cation antiporter activity calcium:monoatomic cation antiporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity antiporter activity active monoatomic ion transmembrane transporter activity active transmembrane transporter activity calcium ion transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity calcium:sodium antiporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity monoatomic cation transmembrane transporter activity metal cation:monoatomic cation antiporter activity calcium:monoatomic cation antiporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity antiporter activity active monoatomic ion transmembrane transporter activity active transmembrane transporter activity calcium ion transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity calcium:sodium antiporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity RNA binding double-stranded RNA binding binding organic cyclic compound binding nucleic acid binding protein binding exogenous protein binding alanine transmembrane transporter activity L-amino acid transmembrane transporter activity organic cation transmembrane transporter activity carboxylic acid transmembrane transporter activity amino acid transmembrane transporter activity L-alanine transmembrane transporter activity neutral L-amino acid transmembrane transporter activity organic acid transmembrane transporter activity organic anion transmembrane transporter activity aromatic amino acid transmembrane transporter activity cell adhesion molecule binding cadherin binding virus receptor activity protein heterodimerization activity protein dimerization activity neutral L-amino acid secondary active transmembrane transporter activity identical protein binding protein homodimerization activity L-leucine transmembrane transporter activity branched-chain amino acid transmembrane transporter activity	nitrogen compound transport organic anion transport carboxylic acid transport transport neutral amino acid transport establishment of localization amino acid transport organic acid transport localization branched-chain amino acid transport isoleucine transport biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process nitrogen compound transport organic anion transport carboxylic acid transport transport neutral amino acid transport establishment of localization amino acid transport organic acid transport localization branched-chain amino acid transport isoleucine transport biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction thyroid hormone transport regulation of hormone levels biological regulation hormone transport regulation of biological quality methionine transport organic cation transport sulfur amino acid transport sulfur compound transport L-amino acid transport L-leucine transport valine transport aromatic amino acid transport tryptophan transport proline transport tyrosine transport carbohydrate metabolic process primary metabolic process metabolic process cellular process phenylalanine transport response to stimulus response to chemical response to dsRNA response to nitrogen compound response to exogenous dsRNA response to organic cyclic compound import into cell carboxylic acid transmembrane transport amino acid transmembrane transport organic acid transmembrane transport L-alanine transmembrane transport import across plasma membrane L-alanine import across plasma membrane alanine transport transmembrane transport L-alanine transport L-alpha-amino acid transmembrane transport amino acid import across plasma membrane L-leucine import across plasma membrane monoatomic ion transport monoatomic cation transport calcium ion transport metal ion transport L-histidine transport basic amino acid transport histidine transport	cellular anatomical structure membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery basal part of cell plasma membrane cellular anatomical structure membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery basal part of cell plasma membrane basal plasma membrane plasma membrane region basolateral plasma membrane vacuolar membrane intracellular anatomical structure lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle lysosomal membrane cytoplasm organelle membrane lysosome somatodendritic compartment cell body cell pole apical pole of neuron neuronal cell body pigment granule intracellular vesicle melanosome cytoplasmic vesicle apical part of cell apical plasma membrane cell surface anchoring junction cell junction nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen synapse amino acid transport complex protein-containing complex plasma membrane protein complex membrane protein complex
D [auth C]	Antibody	-	-	-
E [auth D]	Antibody	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth B]	IPR042280	Amino acid transporter heavy chain SLC3A2	Family
C [auth B]	IPR031984	Solute carrier family 3 member 2, N-terminal domain	Domain
C [auth B]	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
C [auth B]	IPR006047	Glycosyl hydrolase, family 13, catalytic domain	Domain
C [auth B]	IPR013780	Glycosyl hydrolase, all-beta	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth B]	Pharos: P08195	breast cancer Lung Neoplasms polycystic ovary syndrome diabetes mellitus malignant ependymoma tuberculosis lung benign neoplasm

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
C [auth B]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Solute Carrier (SLC) Transporter Superfamily	SLC7A5 L-type amino acid transporter LAT1-CD98hc in complex with MEM-108 Fab

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.