Annotations: 6IKK

Crystal structure of YfiB(L43P) in complex with YfiR

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6ikkc_	Alpha and beta proteins (a+b)	Bacillus chorismate mutase-like	OmpA-like	automated matches	automated matches	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
A	d6ikka_	Alpha and beta proteins (a+b)	Bacillus chorismate mutase-like	OmpA-like	automated matches	automated matches	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	OmpA-like	8092163	3001650	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	OmpA-like	8092163	3001650	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	MS_channel_2nd	e6ikkD1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v294.2)
B	MS_channel_2nd	e6ikkB1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v294.2)
C	MS_channel_2nd	e6ikkC1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v294.2)
A	MS_channel_2nd	e6ikkA1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
A	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, D	PF13689	YfiR/HmsC-like (DUF4154)	YfiR/HmsC-like	-	Family
A, C	PF00691	OmpA family (OmpA)	OmpA family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D	YfiR	-	-	cellular anatomical structure extracellular region periplasmic space
A, C	YfiB	-	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum stator complex bacterial-type flagellum basal body protein-containing complex bacterial-type flagellum motor plasma membrane protein complex membrane plasma membrane membrane protein complex cell periphery cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum bacterial-type flagellum stator complex bacterial-type flagellum basal body protein-containing complex bacterial-type flagellum motor plasma membrane protein complex membrane plasma membrane membrane protein complex cell periphery cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum cell outer membrane external encapsulating structure extracellular region cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D	IPR025293	YfiR/HmsC-like	Family
A, C	IPR006664	Outer membrane protein, bacterial	Domain
A, C	IPR006665	OmpA-like domain	Domain
A, C	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
A, C	IPR036737	OmpA-like domain superfamily	Homologous Superfamily

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