6IIC
CryoEM structure of Mud Crab Dicistrovirus
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CRPV_capsid | e6iicA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: CRPV_capsid | ECOD (1.6) |
C | Rhv_4 | e6iicC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_4 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08762 | CRPV capsid protein like (CRPV_capsid) | CRPV capsid protein like | This is a family of capsid proteins found in positive stranded ssRNA viruses such as cricket paralysis virus (CRPV). It forms an all beta sheet structure [1]. | Domain | |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain | |
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR033703 | Picornavirus/Calicivirus coat protein | Domain | |
IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain | |
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR033703 | Picornavirus/Calicivirus coat protein | Domain | |
IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain | |
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR033703 | Picornavirus/Calicivirus coat protein | Domain | |
IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain | |
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR033703 | Picornavirus/Calicivirus coat protein | Domain |