6IGF
Crystal structure of Human Papillomavirus type 52 pentamer
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
E | SCOP2 Family | papovaviridae-like vp | 8071413 | 4003485 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2 (2022-06-29) |
F | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Group I dsDNA viruses | 8071414 | 3000939 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Late_protein_L1 | e6igfA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
B | Late_protein_L1 | e6igfB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
C | Late_protein_L1 | e6igfC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
D | Late_protein_L1 | e6igfD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
E | Late_protein_L1 | e6igfE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
F | Late_protein_L1 | e6igfF1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
G | Late_protein_L1 | e6igfG1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
H | Late_protein_L1 | e6igfH1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
I | Late_protein_L1 | e6igfI1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
J | Late_protein_L1 | e6igfJ1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
B | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
C | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
D | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
E | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
F | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
G | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
H | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
I | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
J | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |