6IGD
Crystal structure of HPV58/33 chimeric L1 pentamer
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Late_protein_L1 | e6igdB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
C | Late_protein_L1 | e6igdC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
D | Late_protein_L1 | e6igdD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
E | Late_protein_L1 | e6igdE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
F | Late_protein_L1 | e6igdF1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
J | Late_protein_L1 | e6igdJ1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
A | Late_protein_L1 | e6igdA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
G | Late_protein_L1 | e6igdG1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
H | Late_protein_L1 | e6igdH1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
I | Late_protein_L1 | e6igdI1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Late_protein_L1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
C | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
D | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
E | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
F | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
J | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
A | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
G | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
H | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
I | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |