6HXX | pdb_00006hxx

Potato virus Y

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
YA [auth AZ]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
Y [auth AM]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
WA [auth AY]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
W [auth AL]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
UA [auth AX]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
U [auth AK]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
SA [auth AW]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
S [auth AJ]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
QB [auth BI]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
QA [auth AV]	SCOP2 Family	PepMV Coat protein-like	8094688	4005718	SCOP2 (2022-06-29)
QA [auth AV]	SCOP2 Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2 (2022-06-29)
Q [auth AI]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
OB [auth BH]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
OA [auth AU]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
O [auth AH]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
MB [auth BG]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
MA [auth AT]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
M [auth AG]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
KB [auth BF]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
KA [auth AS]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
K [auth AF]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
IB [auth BE]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
IA [auth AR]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
I [auth AE]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
GB [auth BD]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
GA [auth AQ]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
G [auth AD]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
EB [auth BC]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
EA [auth AP]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
E [auth AC]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
CB [auth BB]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
CA [auth AO]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
C [auth AB]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
AB [auth BA]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
AA [auth AN]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)
A [auth AA]	SCOP2B Superfamily	PepMV Coat protein-like	8094689	3002401	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
YA [auth AZ]	LlgE_F_G_D1	e6hxxAZ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
Y [auth AM]	LlgE_F_G_D1	e6hxxAM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
WA [auth AY]	LlgE_F_G_D1	e6hxxAY1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
W [auth AL]	LlgE_F_G_D1	e6hxxAL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
UA [auth AX]	LlgE_F_G_D1	e6hxxAX1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
U [auth AK]	LlgE_F_G_D1	e6hxxAK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
SA [auth AW]	LlgE_F_G_D1	e6hxxAW1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
S [auth AJ]	LlgE_F_G_D1	e6hxxAJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
QB [auth BI]	LlgE_F_G_D1	e6hxxBI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
QA [auth AV]	LlgE_F_G_D1	e6hxxAV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
Q [auth AI]	LlgE_F_G_D1	e6hxxAI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
OB [auth BH]	LlgE_F_G_D1	e6hxxBH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
OA [auth AU]	LlgE_F_G_D1	e6hxxAU1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
O [auth AH]	LlgE_F_G_D1	e6hxxAH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
MB [auth BG]	LlgE_F_G_D1	e6hxxBG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
MA [auth AT]	LlgE_F_G_D1	e6hxxAT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
M [auth AG]	LlgE_F_G_D1	e6hxxAG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
KB [auth BF]	LlgE_F_G_D1	e6hxxBF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
KA [auth AS]	LlgE_F_G_D1	e6hxxAS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
K [auth AF]	LlgE_F_G_D1	e6hxxAF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
IB [auth BE]	LlgE_F_G_D1	e6hxxBE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
IA [auth AR]	LlgE_F_G_D1	e6hxxAR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
I [auth AE]	LlgE_F_G_D1	e6hxxAE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
GB [auth BD]	LlgE_F_G_D1	e6hxxBD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
GA [auth AQ]	LlgE_F_G_D1	e6hxxAQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
G [auth AD]	LlgE_F_G_D1	e6hxxAD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
EB [auth BC]	LlgE_F_G_D1	e6hxxBC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
EA [auth AP]	LlgE_F_G_D1	e6hxxAP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
E [auth AC]	LlgE_F_G_D1	e6hxxAC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
CB [auth BB]	LlgE_F_G_D1	e6hxxBB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
CA [auth AO]	LlgE_F_G_D1	e6hxxAO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
C [auth AB]	LlgE_F_G_D1	e6hxxAB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
AB [auth BA]	LlgE_F_G_D1	e6hxxBA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
AA [auth AN]	LlgE_F_G_D1	e6hxxAN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
A [auth AA]	LlgE_F_G_D1	e6hxxAA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth Aa], BA [auth An], BB [auth Ba], D [auth Ab], DA [auth Ao], B [auth Aa], BA [auth An], BB [auth Ba], D [auth Ab], DA [auth Ao], DB [auth Bb], F [auth Ac], FA [auth Ap], FB [auth Bc], H [auth Ad], HA [auth Aq], HB [auth Bd], J [auth Ae], JA [auth Ar], JB [auth Be], L [auth Af], LA [auth As], LB [auth Bf], N [auth Ag], NA [auth At], NB [auth Bg], P [auth Ah], PA [auth Au], PB [auth Bh], R [auth Ai], RA [auth Av], RB [auth Bi], T [auth Aj], TA [auth Aw], V [auth Ak], VA [auth Ax], X [auth Al], XA [auth Ay], Z [auth Am], ZA [auth Az]	RNA (5'-R(PUPUPUPUP*U)-3')	-	-	-
A [auth AA], AA [auth AN], AB [auth BA], C [auth AB], CA [auth AO], A [auth AA], AA [auth AN], AB [auth BA], C [auth AB], CA [auth AO], CB [auth BB], E [auth AC], EA [auth AP], EB [auth BC], G [auth AD], GA [auth AQ], GB [auth BD], I [auth AE], IA [auth AR], IB [auth BE], K [auth AF], KA [auth AS], KB [auth BF], M [auth AG], MA [auth AT], MB [auth BG], O [auth AH], OA [auth AU], OB [auth BH], Q [auth AI], QA [auth AV], QB [auth BI], S [auth AJ], SA [auth AW], U [auth AK], UA [auth AX], W [auth AL], WA [auth AY], Y [auth AM], YA [auth AZ]	Coat protein	-	-	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AA], AA [auth AN], AB [auth BA], C [auth AB], CA [auth AO], A [auth AA], AA [auth AN], AB [auth BA], C [auth AB], CA [auth AO], CB [auth BB], E [auth AC], EA [auth AP], EB [auth BC], G [auth AD], GA [auth AQ], GB [auth BD], I [auth AE], IA [auth AR], IB [auth BE], K [auth AF], KA [auth AS], KB [auth BF], M [auth AG], MA [auth AT], MB [auth BG], O [auth AH], OA [auth AU], OB [auth BH], Q [auth AI], QA [auth AV], QB [auth BI], S [auth AJ], SA [auth AW], U [auth AK], UA [auth AX], W [auth AL], WA [auth AY], Y [auth AM], YA [auth AZ]	IPR001592	Potyvirus coat protein	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.