Annotations: 6HWX

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Retrovirus capsid protein, N-terminal core domain	8042802	3000745	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Retrovirus capsid protein, N-terminal core domain	8042802	3000745	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Retrovirus capsid protein, N-terminal core domain	8042802	3000745	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Transpeptidase	e6hwxC1	A: beta barrels	X: N-cbl like	H: a+b domain in beta-lactamase/transpeptidase-like proteins	T: a+b domain in beta-lactamase/transpeptidase-like proteins	F: Transpeptidase	ECOD (v294.2)
B	Transpeptidase	e6hwxB1	A: beta barrels	X: N-cbl like	H: a+b domain in beta-lactamase/transpeptidase-like proteins	T: a+b domain in beta-lactamase/transpeptidase-like proteins	F: Transpeptidase	ECOD (v294.2)
A	Gag_p30	e6hwxA1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Gag_p30	ECOD (v294.2)
A	Hemagglutinin	e6hwxA2	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Hemagglutinin	ECOD (v294.2)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Putative gag polyprotein	structural constituent of virion structural molecule activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding RNA binding nucleic acid binding	virion assembly viral process viral budding viral budding via host ESCRT complex viral life cycle	host intracellular membrane-bounded organelle host cellular component host intracellular part host multivesicular body other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host cell late endosome host cell endosome host intracellular region host cell plasma membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host multivesicular body other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host cell late endosome host cell endosome host intracellular region host cell plasma membrane host cell membrane viral nucleocapsid viral capsid virion component

Chains	Accession	Name	Type
A, B, C	IPR050462	Retroviral Gag-Pol polyproteins	Family
A, B, C	IPR036875	Zinc finger, CCHC-type superfamily	Homologous Superfamily
A, B, C	IPR000840	Gamma-retroviral matrix protein	Domain
A, B, C	IPR001878	Zinc finger, CCHC-type	Domain
A, B, C	IPR008919	Retrovirus capsid, N-terminal	Homologous Superfamily
A, B, C	IPR010999	Retroviral matrix protein	Homologous Superfamily
A, B, C	IPR036946	Gamma-retroviral matrix domain superfamily	Homologous Superfamily
A, B, C	IPR002079	Gag polyprotein, inner coat protein p12	Domain
A, B, C	IPR003036	Core shell protein Gag P30	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6HWX | pdb_00006hwx