6HW2
The Crystal Structure of CaV beta4c in complex with HP1gamma chromo shadow domains
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d6hw2b_ | All beta proteins | SH3-like barrel | Chromo domain-like | Chromo domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d6hw2c_ | All beta proteins | SH3-like barrel | Chromo domain-like | Chromo domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SH3-domain | 8056013 | 3000153 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF01393 | e6hw2B1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF01393 | ECOD (1.6) |
C | PF01393 | e6hw2C1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF01393 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (utative) |
B | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (utative) | |
C | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01393 | Chromo shadow domain (Chromo_shadow) | Chromo shadow domain | This domain is distantly related to Pfam:PF00385. This domain is always found in association with a chromo domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008145 | Guanylate kinase/L-type calcium channel beta subunit | Domain | |
IPR036028 | SH3-like domain superfamily | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR000584 | Voltage-dependent calcium channel, L-type, beta subunit | Family | |
IPR001452 | SH3 domain | Domain | |
IPR046937 | Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domain | Domain | |
IPR023780 | Chromo domain | Domain | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR023779 | Chromo domain, conserved site | Conserved Site | |
IPR008251 | Chromo shadow domain | Domain | |
IPR038033 | Chromobox protein homologue 3, chromo domain | Domain | |
IPR000953 | Chromo/chromo shadow domain | Domain | |
IPR017984 | Chromo domain subgroup | Domain |