6H8N
Structure of peptidoglycan deacetylase PdaC from Bacillus subtilis - mutant D285S
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Glycoside hydrolase/deacetylase | 8095523 | 3001025 | SCOP2B (2022-06-29) |
B | SCOP2 Family | NodB-like | 8095522 | 4000448 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Glycoside hydrolase/deacetylase | 8095523 | 3001025 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01522 | e6h8nA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase (From Topology) | T: Glycoside hydrolase/deacetylase | F: PF01522 | ECOD (1.6) |
B | PF01522 | e6h8nB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase (From Topology) | T: Glycoside hydrolase/deacetylase | F: PF01522 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.370 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase/deacetylase | CATH (utative) |
B | 3.20.20.370 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase/deacetylase | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01522 | Polysaccharide deacetylase (Polysacc_deac_1) | Polysaccharide deacetylase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Peptidoglycan-N-acetylmuramic acid deacetylase PdaC |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel | Homologous Superfamily | |
IPR037126 | PdaC/RsiV-like superfamily | Homologous Superfamily | |
IPR017219 | Peptidoglycan GlcNAc deacetylase | Family | |
IPR021729 | Domain of unknown function DUF3298 | Domain | |
IPR025303 | Deacetylase PdaC | Domain | |
IPR002509 | NodB homology domain | Domain |