6H7A
Structure of Leishmania PABP1 (domain J).
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6h7aa1 | All alpha proteins | PABP domain-like | PABC (PABP) domain | automated matches | automated matches | (Leishmania major ) [TaxId: 5664 ], | SCOPe (2.08) |
A | d6h7aa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Leishmania major ) [TaxId: 5664 ], | SCOPe (2.08) |
B | d6h7ab_ | All alpha proteins | PABP domain-like | PABC (PABP) domain | automated matches | automated matches | (Leishmania major ) [TaxId: 5664 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PABP | e6h7aA1 | A: alpha arrays | X: PABP domain-like | H: PABC(PABP) domain (From Topology) | T: PABC(PABP) domain | F: PABP | ECOD (1.6) |
B | PABP | e6h7aB1 | A: alpha arrays | X: PABP domain-like | H: PABC(PABP) domain (From Topology) | T: PABC(PABP) domain | F: PABP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.1900.10 | Mainly Alpha | Orthogonal Bundle | c-terminal domain of poly(a) binding protein | c-terminal domain of poly(a) binding protein | CATH (4.3.0) |
B | 1.10.1900.10 | Mainly Alpha | Orthogonal Bundle | c-terminal domain of poly(a) binding protein | c-terminal domain of poly(a) binding protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00658 | Poly-adenylate binding protein, unique domain (PABP) | Poly-adenylate binding protein, unique domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003954 | RNA recognition motif domain, eukaryote | Domain | |
IPR000504 | RNA recognition motif domain | Domain | |
IPR006515 | Polyadenylate binding protein, human types 1, 2, 3, 4 | Family | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR002004 | Polyadenylate-binding protein/Hyperplastic disc protein | Domain | |
IPR036053 | PABC (PABP) domain | Homologous Superfamily | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily | |
IPR045305 | PABP, RNA recognition motif 2 | Domain |