6GIR
Arabidopsis thaliana cytosolic seryl-tRNA synthetase
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Seryl_tRNA_N | e6girA2 | A: alpha bundles | X: Long alpha-hairpin | H: tRNA-binding arm (From Topology) | T: tRNA-binding arm | F: Seryl_tRNA_N | ECOD (1.6) |
A | tRNA-synt_2b | e6girA1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: tRNA-synt_2b | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00587 | tRNA synthetase class II core domain (G, H, P, S and T) (tRNA-synt_2b) | tRNA synthetase class II core domain (G, H, P, S and T) | tRNA-synt_2b is a family of largely threonyl-tRNA members. | Domain | |
PF02403 | Seryl-tRNA synthetase N-terminal domain (Seryl_tRNA_N) | Seryl-tRNA synthetase N-terminal domain | This domain is found associated with the Pfam tRNA synthetase class II domain (Pfam:PF00587) and represents the N-terminal domain of seryl-tRNA synthetase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045864 | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Homologous Superfamily | |
IPR042103 | Serine-tRNA synthetase, type1, N-terminal domain superfamily | Homologous Superfamily | |
IPR002317 | Serine-tRNA ligase, type1 | Family | |
IPR015866 | Serine-tRNA synthetase, type1, N-terminal | Domain | |
IPR006195 | Aminoacyl-tRNA synthetase, class II | Domain | |
IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) | Domain | |
IPR010978 | Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm | Homologous Superfamily | |
IPR033729 | Serine-tRNA ligase catalytic core domain | Domain |